| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0185 |
|---|
| Symbol | |
|---|
| ID | 8647684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 222841 |
|---|
| End bp | 224151 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003324782 |
|---|
| Protein GI | 269954993 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.515223 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA CGAAGCGCGC CGCGTCCGCT CTCGCGCTGG GCGCGGCCAT CGCGCTGCTG
GCCTCCGGCT GCGCCGGCCG CGCGGCACCC GGCGGTCTCG ACAACGTGCA GACCATCACC
TGGTGGCACA ACTCGACACA GACGGCGGCC AAGGACTACT ACGACAAGGT CGCGAACGAC
TTCGAGCGAG ATCACCCCGG CGTCAACGTC GAGGTCACGG CGCTCGAGCA CTCCGACATG
CTCGCCCGGC TCGACGCCAC GCTGGAGTCG GACGACCCCG AGCAGGTGCC CGACGTCTTC
ATGTCCCGCG GTGGTGGTGA GCTGGAGGGC GAGGTCGCGG CCGGCGTGAC GCGTGACCTG
ACCAAGGTCG CCGCGGAGGA GCTGGCCAAG ATCAGCCGGT TCACGAACGA CTACACCGTG
GACGGCAAGG TCTACGCCCT GCCGTACTCC ATGGGCATCG TCGGCTTCTA CTACAACACC
GACCTGTTCG AGCAGGCCGG CATCACCGAG GTCAACCCGA GCCCGACGAT CGACGAGTTC
AACGGCTGGA TCGACCAGCT CCAGGCGGCC GGCATCCCGC CGATCTCGGT GGGCGCGGGC
GACAAGTGGC CTGCCGCGCA CTACTGGTTC TACAACGTGG TGCGTGAGTG CACCTACGAC
ACGGTCGAGG CCGCGATCGC GTCGAAGAGC TACGCCGACC CGTGCTTCCT GCGGGCCGGG
GAGAGCCTCT CGGCGCTCGT CGCGAAGCAG CCGTTCAACG AGGGCTACGC GACGACGGCC
GCGCAGGAAG GGCCGACGTC GGCGTCCGGT CTGCTCGCCA ACGGCCAGGT GGCCATGGAG
CTCGCCGGCC ACTGGGAGCC CGGCCTCGTC GGCGGTCTGC GTGCCGACGG CACCGTGCCC
GACACGCTGA GCTGGTTCGC CTATCCGACG TTCCCCGGCC AGGCCGGCGA CCCGCTCGAC
CAGATGGGCG GCGGTGACGC GTGGGAGGTG TCGACCTCGG CCCCCGACGT CGCCGTGGAC
CTCGCGAAGT ACCTGCTCTC GGACGAGGTG CAGAAGGGCT TCGCGGAGCT GAACATGGGC
CTGCCCACCA ACCCGGCGGC GGCGGACTCG ATCGCGTTCC CCGCCCTGCA GGACCTCGTC
GCCGTGCGTG ACAAGGCCAG CCGTGCACCG CAGCTCTACC TGGACACCCG CCTCGGCAGC
AAGATCGGTG ACCCGCTGGT CGCCGAGATC TACAAGGTGT TCACCGGCGA GTCCGGCGCG
CAGCAGGTGG TCGACGCGAT CAACGCGGCG GCCAACGGCT CCACCGAGTA G
|
|---|
| Protein sequence | MTTTKRAASA LALGAAIALL ASGCAGRAAP GGLDNVQTIT WWHNSTQTAA KDYYDKVAND
FERDHPGVNV EVTALEHSDM LARLDATLES DDPEQVPDVF MSRGGGELEG EVAAGVTRDL
TKVAAEELAK ISRFTNDYTV DGKVYALPYS MGIVGFYYNT DLFEQAGITE VNPSPTIDEF
NGWIDQLQAA GIPPISVGAG DKWPAAHYWF YNVVRECTYD TVEAAIASKS YADPCFLRAG
ESLSALVAKQ PFNEGYATTA AQEGPTSASG LLANGQVAME LAGHWEPGLV GGLRADGTVP
DTLSWFAYPT FPGQAGDPLD QMGGGDAWEV STSAPDVAVD LAKYLLSDEV QKGFAELNMG
LPTNPAAADS IAFPALQDLV AVRDKASRAP QLYLDTRLGS KIGDPLVAEI YKVFTGESGA
QQVVDAINAA ANGSTE
|
|---|
| |