Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_7939 |
Symbol | |
ID | 8671264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 8750591 |
End bp | 8751877 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | ABC transporter (substrate-binding protein) |
Protein accession | YP_003343338 |
Protein GI | 271969142 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.50295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.560439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGAC GGTGGATGGC GGCCGTCGCG GTCACCGTGG CGGGCCTGCT CACCCTGACG GCCTGCGGCG ACGGCGGCGG CGCCGCGCAA ACCCCGCAGG CCGGCGGAGA GAAGAAGGTT GAGGTCTTCT CCTGGTGGAC GGGACCGGGC GAGGCCGACG GCCTGAAGGC CATGAAAGAG ATCTTCGAGA AGCAGAACCC CGGCCTGACG TTCTTCGACG CGGCCGTGGC GGGCGGTTCC GGCGACAAGG CGCGCGCCCT GCTGGCCACC AAGCTGCAGG CCGACACCCC GCCGGACACC TTCCAGGGGC ACGCGGGCGC CGAGCTGCAG GGCTACATCA AGGCCGGTGA CCTGGAGCCG GTCAACTCCC TCTACGACGA GCTCAAGCTG AAGGACGTCT TCCCGCAGCA GCTCGTCGAC CAGATCAGCG TGCAGGGCCA GATCTACTCG GTCCCGGTGA ACATCCACCG CTCCAACGTG ATGTGGTTCA ACCCCGCCGT GCTCAAGGAG GCGGGCGTCA CCGAGGTGCC CAAGACGATC GAGGAGTTCA CCGCCGCCCT GGAGAAGGTC AAGAAGACGG GCAAGATCCC GCTCGCGATC GGCTCCGAGT GGACGATGGT GCACCTGCTG GAGAGCGTGC TGCTCGGCTC GCTCGGCACC GAGGCCTACA ACCAGCTCTG GACCGCGGGG TCCGACTGGT CGGGTCCGGC GATGACCAAG GCGCTCAACG ACTTCAAGAC GGTCCTGTCC TACGCCGGGG ACCCGGCCGA CGACTGGCAG CCCGCGGCCA AGCAGGTCGC CGACGGCCAG GCCGCGTTCA CGATCATGGG CGACTGGGCG TACGGCTACT TCCACAACCC GCCGGACGGC GGCCTGGGCA AGAAGTCCAA GACCGACTTC GACTGGGCGC CCTCGCCCGG CACCGGCGGC ACCTTCATGT GGCTGTCGGA CAGCTTCACC CTGCCCAAGG GCGCGCCGAA CCGCGCCGGG GCGGTGGCCT GGCTGAAGGT GGCCGCGAGC AAGGAGGGCC AGGACGCCTT CAACCCCAAG AAGGGCTCCA TCCCGGCCCG CAAGGACGCC GACACCTCCC TCTACACCGA CTACCTCGCC GACGCGCTGA AGGACTGGGG GAGCAACAAG CTCGCCGGGT CCATCCAGCA CGGCGTCACC GTCAACGACG CCTGGCGGGT CTCGATCAAC GAGGCGGTCG GCCTCTTCCA CACCGACAAG GACGTGGCCG CGCTCCAGGC CGCGCTGGCC GAGGCCGCCA AGAACTCGGG TCAGTGA
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Protein sequence | MRRRWMAAVA VTVAGLLTLT ACGDGGGAAQ TPQAGGEKKV EVFSWWTGPG EADGLKAMKE IFEKQNPGLT FFDAAVAGGS GDKARALLAT KLQADTPPDT FQGHAGAELQ GYIKAGDLEP VNSLYDELKL KDVFPQQLVD QISVQGQIYS VPVNIHRSNV MWFNPAVLKE AGVTEVPKTI EEFTAALEKV KKTGKIPLAI GSEWTMVHLL ESVLLGSLGT EAYNQLWTAG SDWSGPAMTK ALNDFKTVLS YAGDPADDWQ PAAKQVADGQ AAFTIMGDWA YGYFHNPPDG GLGKKSKTDF DWAPSPGTGG TFMWLSDSFT LPKGAPNRAG AVAWLKVAAS KEGQDAFNPK KGSIPARKDA DTSLYTDYLA DALKDWGSNK LAGSIQHGVT VNDAWRVSIN EAVGLFHTDK DVAALQAALA EAAKNSGQ
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