| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1025 |
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| Symbol | |
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| ID | 7312175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 1277219 |
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| End bp | 1278553 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643607952 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002505367 |
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| Protein GI | 220928458 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000399953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGC ACAAGATTTT AGTATCTACC ATACTATCTG TAGCGATGTT GTTATCTATA
ACTGCATGTG GATCTAATGA TGCGGGATCT GGTGATAAGG CACAGAGTAC GGGTACTACA
TCTGCTGATA CAAATAAAGA AAATAAAGGT ACTACTAAAT TAACAATGTG GCATATCCAG
ACACAAGAAA ATGTTGCTGA TATTATTGAT GCTTCAATGG ATAGATTTGC AAAAGACAAT
CCAGGTTTTG AAATGGAAGC TGTCCCAATG CAAAATGACC CATATAAGAC CAAACTTATC
ACTGCAATGA GTGCAAATGA ACTCCCTGAC GTCTTTATTC ACTGGACAGG AGGTCCGATG
ATCTCCTACA TTGATTCAGG TGCAGTATAT GATATAACTG AATATATGAA TAAAGATAAT
TACAAGGATA AATTCCTGGA TGCTTCTATA CAGCAAGCTA CTTATAAAGA TTCCATTTGG
GCTGTTCCTG TAGAAAATGT ATCTCCTGCC CTGATGTTCT ACAACAAAAA GCTGTTTGCT
GATAATGGCA TTGAAGTTCC AAAAACTCTT GACGAATTTG AAAAAGTAAG TGACACTTTT
GTACAAAAGG GTATCATACC TGTTTCACTT GCTAACAAGA CAAAATGGCC TGGATCAATT
GTATATGGAT ATGTTCTGGA TAGAATAGCT GGTCCAAATG CATTTGCAGA TGCAAATAAC
GGCGTAACTC AATTTGATAC ACCAGACTTT TTGGCTGCCG CTACAAAAAT ACAAACTTGG
GCTAAAAAAG GTTATTTCGG GAAAGACTTC AACGGAATGG ACTATGATGC CGGTCAAGAC
AGACAATTGT TCTACAATGG TAAAGCAGCC ATGTACATAA TGGGAGGCTG GTTCCTGTTT
ACTGCAAAGG GAGAAAATCC AGAATTTGTT GAAAATGTAG GAGTAATGCA GTTCCCAGCA
AACCCTGACA GCAAGGGTAA GGCATCCGAA TATATCGGTA CAATGGGTGA CAACTTCTAT
TCTGTATCCA AGAATTCCAA GAACCCAGAG ATGGCATTCA AAGCTATTAC ATATATGCTT
GATGATCAGG CTGTTAAGGA AAGGATTGAA TCAGGAAAAA TTCCTCCTCT TAAAGGCATA
ACATTGACTG ATGAAATCAG TAAAATTGTT TCTGATAGTG CATCTTCAGC TACAAGCATG
CAGCTCTGGC TTGATCAGTA TCTTGCACCG AACGATGCAG AATTACATAA AGATCAATTA
CAAAAATTAT TGGCTGGTTC GATCACACCT GAACAATATA ATAAAAGTAT GACGGATGGC
GTAAAGAACA AATAA
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| Protein sequence | MKMHKILVST ILSVAMLLSI TACGSNDAGS GDKAQSTGTT SADTNKENKG TTKLTMWHIQ
TQENVADIID ASMDRFAKDN PGFEMEAVPM QNDPYKTKLI TAMSANELPD VFIHWTGGPM
ISYIDSGAVY DITEYMNKDN YKDKFLDASI QQATYKDSIW AVPVENVSPA LMFYNKKLFA
DNGIEVPKTL DEFEKVSDTF VQKGIIPVSL ANKTKWPGSI VYGYVLDRIA GPNAFADANN
GVTQFDTPDF LAAATKIQTW AKKGYFGKDF NGMDYDAGQD RQLFYNGKAA MYIMGGWFLF
TAKGENPEFV ENVGVMQFPA NPDSKGKASE YIGTMGDNFY SVSKNSKNPE MAFKAITYML
DDQAVKERIE SGKIPPLKGI TLTDEISKIV SDSASSATSM QLWLDQYLAP NDAELHKDQL
QKLLAGSITP EQYNKSMTDG VKNK
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