| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0477 |
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| Symbol | |
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| ID | 8331804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 542651 |
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| End bp | 543949 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644953643 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003111270 |
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| Protein GI | 256389706 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.838392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACGA GAATGCGCAG CGCGATAGCC GTCTTCCTCG GCTTGGGCAC GATGCTCGCC
GCCACCGGCT GTGCCGGCAG CAGCGGCGGC GGGGGCGGCG GTTCGTCCGA CGGCAAGGTG
ACGGTGACCG TCTGGGAGAA CGCGACGAAC GGCCCGGACG GCCTGCAGTA CTTCCAGAGC
GCCGCGAAGC AGTACCAGGC CCTGCACCCG AACGTCACGA TCTCGTTCCA GACGATCCAG
AACGAGGCAC TCGACGGCAA GCTCCAGACC GCCCTCAACT CGAACAGCGC GCCGGACGTC
TTCTTCCAGG TCGGCGGCGG CAAGATGCGG GCCCAGGTCG CCGCCGGCGA ACTCCAGCCG
CTGAACCTCA CCGACGCGGA CAAGACCGAC GTCGGCGCGG CGGCCCTGTC CGGCAGCACG
CTCGACGGCA AGGTCTACAT GATGCCGGTC GACACGCAGC CCGAGGGCAT CTACTACAGC
AAGAACCTGT TCCAGCAAGC CGGCATCACC ACGACGCCCA CGACGATCGA CGAGCTCGAA
GCCGACGTCG CCAAGCTCAA GGCAATCAAC GTCGCACCGA TCGCAGTCGG AGCCAAGGAC
GCCTGGCCCG CCGCGCACTG GTACTACAAC TTCGCCCTCC GCGAGTGCAG CCAATCCGTC
ATGGCGAGCA CCGCCAAGTC GCTCAAGTTC ACCGACCCAT GCTGGACCAC AGCCGGAAAC
GCCCTGGCCA CATTCCTCAA GACCAACCCC TTCCCAGCCG GCTTCCTGAC AACCGCAGCC
CAGCAAGGCG CCGGCTCCTC AGCGGGCCTA CTCGCCAATC ACAAGGCAGC CATGGAGCTC
ATGGGCTCCT GGGACCCCGG CGTAATCGCC AGCTTGACCC CGGACCAGAA GCCGCTCCCC
GACCTGGGCT GGTTCCCGTT CCCCGCAGTA GCCGGCGGCC AAGGCGACCC CTCCGCAATC
ATGGGCGGCA ACTCCGCCTA CTCGCTGTCC AAGAAGGCAC CAAAGGAGGC CTTCGGCTTC
CTGGAGTTCA TGCTGACCAA GGACCAGCAG GAGGCATACT CCAAGGCCTT CCAATCAATC
CCGGTGAACC CGGCGTCCCA GGACGTCGTC ACCACCTCCT ACAACATCTC AGCACTGCAA
GCCTTCAACA AGGCCGCCTA CTCAATGCAG TACCTCGACA CCCAGTTCGG CCTAAACGTC
GGCAACGCCC TAAACACCGC CGTCGTCAAC CTCATGGCCG GCCGAGGCAG CGCCGCCGAA
ATCGTCACGC AGGCCAACGC CGCCGCGGCG AAGGGCTGA
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| Protein sequence | MTTRMRSAIA VFLGLGTMLA ATGCAGSSGG GGGGSSDGKV TVTVWENATN GPDGLQYFQS
AAKQYQALHP NVTISFQTIQ NEALDGKLQT ALNSNSAPDV FFQVGGGKMR AQVAAGELQP
LNLTDADKTD VGAAALSGST LDGKVYMMPV DTQPEGIYYS KNLFQQAGIT TTPTTIDELE
ADVAKLKAIN VAPIAVGAKD AWPAAHWYYN FALRECSQSV MASTAKSLKF TDPCWTTAGN
ALATFLKTNP FPAGFLTTAA QQGAGSSAGL LANHKAAMEL MGSWDPGVIA SLTPDQKPLP
DLGWFPFPAV AGGQGDPSAI MGGNSAYSLS KKAPKEAFGF LEFMLTKDQQ EAYSKAFQSI
PVNPASQDVV TTSYNISALQ AFNKAAYSMQ YLDTQFGLNV GNALNTAVVN LMAGRGSAAE
IVTQANAAAA KG
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