Gene RSP_3941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3941 
SymbolyurO 
ID3712062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007488 
Strand
Start bp110333 
End bp111643 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content66% 
IMG OID640069397 
ProductABC sugar transporter, periplasmic ligand binding protein 
Protein accessionYP_345264 
Protein GI77404690 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.487085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGGT CCTTGCAGTC CATGACAGCC ATCGTCGCCG CACTGTCGGC GCTGGGAGCG 
GGCGCCGCCG CGGCCCAGAC GGCGGTCGCC GATCCCGCGG CCCCGGTCGA ATACGAGGGC
ACGATCAAGG TGCTGACCAA GTTCGGGATG CAGCGCCTCG CGCCCTATTT CACCGAGCTG
GCGCAGGAAT ACGAGGCGCA GCATCCCGGC GTCACAATCG AGCTCATCCA GGAAGACGAT
GACAGCGTGA AGGGCAAGAC CAAGACGCTG GTCGCCTCGA ACTCGATCCC GGATGTCTTC
TTCTCCTGGA CCGGCACCTG GGGCGGCAAC TTCATCCGCG GCAAGCGGGC GGTGGATCTG
ACGCCGGTGA TCGGACCGGA CACGGACTGG GGCAAGACCT TCGCCCCGGC CGCGGTCGAT
GCCTTCGTCT ACGACGGCAA GCATTATGGC ATCCCGCTCT ATCTCGATGC GAAATTCATG
GGCTACAGCA AGCCCATCTT CGAGAAGCTG GGCCTGTCGG AGCCCGAGAC GCTCGAGGAC
ATGCTGGCGG CCTGCGACAC GATCAAGGAG GCGGGCATCA CGCCGATCTC GATCGGCAAC
AAGGAGCCCT GGGTCGCCGT CCATTATCTC GGCCAGCTGC TGGCCTACAA CGTGCCGAAG
GACGTGCTGG AGCGCGATTT CGACCCGGCG ACCGCGGACT ATGAAGACCC GGGCTATGTC
GCCTCGCTCG AGCAGTTCAA GGCCATCGCC GACCGCTGCA CCATCGGCGC GGGCATGAAC
GGCATCTCCT ATCAGAATGC GATCCAGGAG CTGAGCGACG GCAAGTCGGC GATGTATTAT
CAGGAGATCA TCGAGTTCGA CAATTCGGCC TCGGACAAGA CCAAGCTCAA GCCCGAGGAG
TTCGGCTTCT TCCCGCTGCC GGCGCCGAAG GATGCCAAGG GCGATCCGAA GGCGCTCGAA
GGCGCGCCCG AGGGCTACAT GATCTCCTCG GCCTCCGAGA ATGTGCCGCT CGCGCTCGAT
TTCATGAAGT TCGTGACGAG TCAGGCCAAT GCGAAGGTGC TGTCGGCCCC GCCCTACGGC
CAGCCGAGCG CCGTGGTGGG CGGCGCGGAT CCGGCGCAGA TGAGCCCGGC CGTGGTGGGC
GGCCTCGAGG ATATCGCCGA GGCCTCCTAC CTGATGCAGT GGCTGGATAC GGTGAACCAT
CCGCGCGTCG CCGCGGCGTG GCTGTCGAAC CTGCAGGCCT TCGCGGGCGG CAACCTCACG
GCCGAGGAGG TCGTGGCCGA AGTCCGTGCG GCCGCCGCCG CGGCCAAGTG A
 
Protein sequence
MKRSLQSMTA IVAALSALGA GAAAAQTAVA DPAAPVEYEG TIKVLTKFGM QRLAPYFTEL 
AQEYEAQHPG VTIELIQEDD DSVKGKTKTL VASNSIPDVF FSWTGTWGGN FIRGKRAVDL
TPVIGPDTDW GKTFAPAAVD AFVYDGKHYG IPLYLDAKFM GYSKPIFEKL GLSEPETLED
MLAACDTIKE AGITPISIGN KEPWVAVHYL GQLLAYNVPK DVLERDFDPA TADYEDPGYV
ASLEQFKAIA DRCTIGAGMN GISYQNAIQE LSDGKSAMYY QEIIEFDNSA SDKTKLKPEE
FGFFPLPAPK DAKGDPKALE GAPEGYMISS ASENVPLALD FMKFVTSQAN AKVLSAPPYG
QPSAVVGGAD PAQMSPAVVG GLEDIAEASY LMQWLDTVNH PRVAAAWLSN LQAFAGGNLT
AEEVVAEVRA AAAAAK