| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0944 |
|---|
| Symbol | |
|---|
| ID | 4693580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1057692 |
|---|
| End bp | 1058960 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639848722 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_995740 |
|---|
| Protein GI | 121607933 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.544942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCCG CACCACTTTG CAGCGCAGCG CTGGCCTTCG GGCTGGCGAC GGCAGCGCTC
GCCCAAGAGC CCAAGGTGAT TACCGAATGG GACATTCAGA CCCAGCCCGG GGGCTCCAAG
CTGATACAGG AGGCGCAGGC GCGCTTCGAG AAGGCCAACC CCGGCTTCAA GGTGCAGCGC
ACGCAAATCC CCAACGACGC CTACAAGACC AAGCTGAAGA TCGCGATGGG GGCCAATGAG
CCGCCATGCG TGTTCACGAG TTGGGGCGGC GGGGTGCTGC GCGAGTACAT CAAGGCCGGT
CAAGTCGTCG ACCTCGGTCC TTACCTGGCC AAAGATCCCG CGTTTCGTGA GCGCTTCCTG
CCCAGCGCCT TCGACGCCAT CACCTGGCAG GGCAAAACCT ACGGCCTGCC GGGGGAGAAC
ACCACCGCAG CCGTGATTTA CTACAACACC GAGATCTTCG CCAAGTTCGG GCTCGCGCCG
CCCAAGACCT GGCCCGAACT GATGAAGCTC GTCGAGACGC TCAAGGCCAA CGACGTGGCC
CCGTTTGCCC TGGCCAACAA GGCCAAGTGG CCCGGTTCGA TGTACTACAT GTACCTCGTC
GACCGCATTG GCGGACCGGA GGTGTTCCGC AAAGCCATTG CCCGCGCGCC GGGTGGCAGC
TTTGCCGACC CGGCCTTCGT CGAGGCCGGC AAATATCTGC AAGAACTGGT CAAGGCCGGC
GCCTTCGCGC AGGGCTTCAA CGGCCTGGAC TACGACATTG GCGCAGCGCG CAGATTGCTG
TACTCGGGCA AGGCCGCCAT GGAACTGATG GGAACCTGGG AATCATCGAA CATCAAGAAC
GAAAACCCGG AATTCGCCAA AAAGGTGGAC TTCTTCCCGT TCCCCGGCGT GCCGGGCGGC
AAGGGGCAGG CGGGCAATGT CGTCGGCTCC GTGGGGCAAA ACTTCTACAG CATATCGACG
GCCTGCAAGA CGCCCGAGGC GGCCTACCAG TTGATCACGA CGATGCTCGA CGAGGCCTCG
GTCAAGGCGC GCCTGGCAGA CAAGCGCCTG GTGCCGGTCA AGGAACTGAC GATCGCCGAT
GCCCCGATGC AGCGGGTGAT GCAACTGGTG GCCGACGCGC CGGCCGTGCA ACTGTGGTAC
GACCAGGAAC TGCCGCCGCA GTTGGCCGAA CTGCACAAGG ACACGGTGCA GGCCCTGTTC
GGGCTGTCGA TCACGCCCGA AGAAGCAGCG CAAAAGATGC AAGCGCTGGC CGCGCAAATC
CTCAAGTAG
|
|---|
| Protein sequence | MNPAPLCSAA LAFGLATAAL AQEPKVITEW DIQTQPGGSK LIQEAQARFE KANPGFKVQR
TQIPNDAYKT KLKIAMGANE PPCVFTSWGG GVLREYIKAG QVVDLGPYLA KDPAFRERFL
PSAFDAITWQ GKTYGLPGEN TTAAVIYYNT EIFAKFGLAP PKTWPELMKL VETLKANDVA
PFALANKAKW PGSMYYMYLV DRIGGPEVFR KAIARAPGGS FADPAFVEAG KYLQELVKAG
AFAQGFNGLD YDIGAARRLL YSGKAAMELM GTWESSNIKN ENPEFAKKVD FFPFPGVPGG
KGQAGNVVGS VGQNFYSIST ACKTPEAAYQ LITTMLDEAS VKARLADKRL VPVKELTIAD
APMQRVMQLV ADAPAVQLWY DQELPPQLAE LHKDTVQALF GLSITPEEAA QKMQALAAQI
LK
|
|---|
| |