More than 300 homologs were found in PanDaTox collection
for query gene Ccel_1136 on replicon NC_011898
Organism: Clostridium cellulolyticum H10



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011898  Ccel_1136  extracellular solute-binding protein family 1  100 
 
 
431 aa  880    Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1133  extracellular solute-binding protein family 1  43.15 
 
 
451 aa  390  1e-107  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2696  extracellular solute-binding protein  42.66 
 
 
420 aa  365  1e-100  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.240659  n/a   
 
 
-
 
NC_012034  Athe_0614  extracellular solute-binding protein family 1  43.51 
 
 
435 aa  352  5.9999999999999994e-96  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0944  extracellular solute-binding protein  41.27 
 
 
422 aa  348  1e-94  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.544942  normal 
 
 
-
 
NC_011898  Ccel_1025  extracellular solute-binding protein family 1  37.36 
 
 
444 aa  291  1e-77  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.00000399953  n/a   
 
 
-
 
NC_013526  Tter_2659  extracellular solute-binding protein family 1  28.43 
 
 
495 aa  184  2.0000000000000003e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0361435  n/a   
 
 
-
 
NC_014210  Ndas_2345  extracellular solute-binding protein family 1  28.67 
 
 
424 aa  184  2.0000000000000003e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.822896  normal  0.413258 
 
 
-
 
NC_007333  Tfu_1619  putative sugar-binding lipoprotein  30.03 
 
 
434 aa  184  3e-45  Thermobifida fusca YX  Bacteria  normal  0.195944  n/a   
 
 
-
 
NC_013159  Svir_23430  ABC-type sugar transport system, periplasmic component  27.25 
 
 
435 aa  176  8e-43  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.969599  normal 
 
 
-
 
NC_013411  GYMC61_2716  extracellular solute-binding protein family 1  30.53 
 
 
441 aa  172  6.999999999999999e-42  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014165  Tbis_3251  extracellular solute-binding protein family 1  27.07 
 
 
427 aa  171  3e-41  Thermobispora bispora DSM 43833  Bacteria  normal  0.829082  normal 
 
 
-
 
NC_014165  Tbis_0069  extracellular solute-binding protein family 1  28.18 
 
 
448 aa  163  6e-39  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0090  extracellular solute-binding protein  27.69 
 
 
441 aa  154  2.9999999999999998e-36  Arthrobacter sp. FB24  Bacteria  normal  0.214251  n/a   
 
 
-
 
NC_009664  Krad_0972  extracellular solute-binding protein family 1  28.65 
 
 
442 aa  154  2.9999999999999998e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0353052 
 
 
-
 
NC_013947  Snas_3251  extracellular solute-binding protein family 1  27.34 
 
 
428 aa  152  2e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.292164  normal  0.0559218 
 
 
-
 
NC_009664  Krad_3573  extracellular solute-binding protein family 1  26.02 
 
 
441 aa  147  4.0000000000000006e-34  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.862573  normal  0.0197328 
 
 
-
 
NC_011898  Ccel_0200  extracellular solute-binding protein family 1  25.39 
 
 
441 aa  147  5e-34  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1105  extracellular solute-binding protein family 1  25.37 
 
 
442 aa  146  7.0000000000000006e-34  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.314126  normal  0.258829 
 
 
-
 
NC_013172  Bfae_01550  ABC-type sugar transport system, periplasmic component  26.93 
 
 
438 aa  139  1e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3985  putative ABC sugar transporter (substrate binding protein)  27.44 
 
 
419 aa  137  3.0000000000000003e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2950  extracellular solute-binding protein  26.52 
 
 
435 aa  134  3.9999999999999996e-30  Sinorhizobium medicae WSM419  Bacteria  normal  0.110397  normal 
 
 
-
 
NC_010001  Cphy_1529  extracellular solute-binding protein  33.9 
 
 
439 aa  132  2.0000000000000002e-29  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3054  extracellular solute-binding protein family 1  26.38 
 
 
429 aa  130  4.0000000000000003e-29  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0183103 
 
 
-
 
NC_009620  Smed_4017  extracellular solute-binding protein  25.07 
 
 
435 aa  126  8.000000000000001e-28  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2404  extracellular solute-binding protein family 1  25.91 
 
 
424 aa  125  1e-27  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000132449  n/a   
 
 
-
 
NC_011899  Hore_13140  extracellular solute-binding protein family 1  26.1 
 
 
424 aa  124  3e-27  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1874  MalE-type ABC sugar transport system periplasmic component  24.87 
 
 
427 aa  122  9e-27  Bifidobacterium longum DJO10A  Bacteria  normal  0.0756635  n/a   
 
 
-
 
NC_013174  Jden_2072  extracellular solute-binding protein family 1  25.12 
 
 
431 aa  122  9.999999999999999e-27  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.0000000238529  normal 
 
 
-
 
NC_014151  Cfla_1126  extracellular solute-binding protein family 1  25.97 
 
 
433 aa  120  3e-26  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.162135  hitchhiker  0.000581091 
 
 
-
 
NC_008578  Acel_2049  extracellular solute-binding protein  27.17 
 
 
435 aa  120  4.9999999999999996e-26  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_1999  extracellular solute-binding protein family 1  23.74 
 
 
468 aa  118  1.9999999999999998e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3052  extracellular solute-binding protein family 1  26.47 
 
 
427 aa  117  3.9999999999999997e-25  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.854825  normal  0.208902 
 
 
-
 
NC_011369  Rleg2_1685  extracellular solute-binding protein family 1  24.8 
 
 
434 aa  115  1.0000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0477  extracellular solute-binding protein family 1  27.45 
 
 
432 aa  115  2.0000000000000002e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.838392  normal 
 
 
-
 
NC_013131  Caci_3587  extracellular solute-binding protein family 1  27.33 
 
 
441 aa  115  2.0000000000000002e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.935518  normal  0.988969 
 
 
-
 
NC_012850  Rleg_1866  extracellular solute-binding protein family 1  24.54 
 
 
434 aa  114  5e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_11540  ABC-type sugar transport system, periplasmic component  26.17 
 
 
428 aa  112  1.0000000000000001e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0159385 
 
 
-
 
NC_009654  Mmwyl1_2762  extracellular solute-binding protein  24.5 
 
 
431 aa  110  7.000000000000001e-23  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1291  extracellular solute-binding protein family 1  25.74 
 
 
470 aa  108  2e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_2115  extracellular solute-binding protein family 1  29.83 
 
 
432 aa  105  2e-21  Clostridium cellulolyticum H10  Bacteria  normal  0.845793  n/a   
 
 
-
 
NC_012669  Bcav_2719  extracellular solute-binding protein family 1  24.17 
 
 
434 aa  100  7e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.233137 
 
 
-
 
NC_013530  Xcel_0185  extracellular solute-binding protein family 1  25.07 
 
 
436 aa  92.8  1e-17  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.515223  n/a   
 
 
-
 
NC_008148  Rxyl_0621  extracellular solute-binding protein  24.86 
 
 
427 aa  89.7  9e-17  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.178997  n/a   
 
 
-
 
NC_010001  Cphy_3409  extracellular solute-binding protein  23.76 
 
 
451 aa  88.2  2e-16  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000000553575  n/a   
 
 
-
 
NC_012034  Athe_0598  extracellular solute-binding protein family 1  25.21 
 
 
446 aa  87.8  3e-16  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.764573  n/a   
 
 
-
 
NC_013172  Bfae_27700  ABC-type sugar transport system, periplasmic component  21.58 
 
 
426 aa  87  5e-16  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0996  extracellular solute-binding protein family 1  25.88 
 
 
455 aa  84.3  0.000000000000004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1301  MalE-type ABC sugar transport system periplasmic component  25.08 
 
 
441 aa  83.6  0.000000000000007  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2754  extracellular solute-binding protein family 1  23.85 
 
 
443 aa  81.6  0.00000000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2391  extracellular solute-binding protein family 1  23.58 
 
 
422 aa  81.3  0.00000000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  0.436445  normal 
 
 
-
 
NC_011891  A2cp1_4289  extracellular solute-binding protein family 1  25.85 
 
 
400 aa  81.3  0.00000000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.53848  n/a   
 
 
-
 
NC_009654  Mmwyl1_2016  extracellular solute-binding protein  25.18 
 
 
408 aa  79.7  0.00000000000009  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00148299  normal 
 
 
-
 
NC_007760  Adeh_4136  ABC sugar transporter, periplasmic ligand binding protein  25.68 
 
 
400 aa  79  0.0000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3983  extracellular solute-binding protein family 1  22.54 
 
 
456 aa  79.3  0.0000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_4267  extracellular solute-binding protein family 1  25.45 
 
 
400 aa  79  0.0000000000002  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0296  hypothetical protein  21.17 
 
 
439 aa  79  0.0000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  27.22 
 
 
422 aa  78.2  0.0000000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013171  Apre_0238  extracellular solute-binding protein family 1  25.33 
 
 
423 aa  78.2  0.0000000000003  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2008  ABC transporter extracellular solute-binding protein  24.91 
 
 
408 aa  77.4  0.0000000000005  Psychromonas ingrahamii 37  Bacteria  normal  0.247518  normal 
 
 
-
 
NC_009831  Ssed_1010  ABC-type sugar transport system, periplasmic component  23.86 
 
 
380 aa  74.3  0.000000000004  Shewanella sediminis HAW-EB3  Bacteria  normal  0.283496  normal 
 
 
-
 
NC_008254  Meso_1094  extracellular solute-binding protein  26.12 
 
 
434 aa  73.6  0.000000000006  Chelativorans sp. BNC1  Bacteria  normal  0.161365  n/a   
 
 
-
 
NC_011899  Hore_20520  extracellular solute-binding protein family 1  21.39 
 
 
417 aa  73.2  0.000000000009  Halothermothrix orenii H 168  Bacteria  normal  0.561553  n/a   
 
 
-
 
NC_012669  Bcav_1698  extracellular solute-binding protein family 1  28.29 
 
 
447 aa  72.8  0.00000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3155  extracellular solute-binding protein family 1  27.08 
 
 
434 aa  71.2  0.00000000003  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0913  extracellular solute-binding protein family 1  23.82 
 
 
421 aa  71.2  0.00000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_1963  extracellular solute-binding protein family 1  22.59 
 
 
449 aa  71.2  0.00000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.734467  n/a   
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  23.61 
 
 
424 aa  71.2  0.00000000003  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_008541  Arth_1705  extracellular solute-binding protein  21.48 
 
 
444 aa  71.2  0.00000000004  Arthrobacter sp. FB24  Bacteria  normal  0.751939  n/a   
 
 
-
 
NC_007488  RSP_3941  ABC sugar transporter, periplasmic ligand binding protein  21.84 
 
 
436 aa  70.5  0.00000000005  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.487085  n/a   
 
 
-
 
NC_008262  CPR_0904  ABC transporter, periplasmic substrate-binding protein, putative  22.28 
 
 
439 aa  70.5  0.00000000005  Clostridium perfringens SM101  Bacteria  decreased coverage  0.00221898  n/a   
 
 
-
 
NC_008228  Patl_2572  extracellular solute-binding protein  21.65 
 
 
414 aa  70.1  0.00000000007  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_13200  extracellular solute-binding protein family 1  24.56 
 
 
424 aa  69.7  0.00000000009  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7806  extracellular solute-binding protein family 1  26.72 
 
 
452 aa  69.7  0.0000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1218  extracellular solute-binding protein family 1  22.8 
 
 
444 aa  68.6  0.0000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_4547  extracellular solute-binding protein  27.65 
 
 
423 aa  67.8  0.0000000003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.909678  normal 
 
 
-
 
NC_013739  Cwoe_5441  extracellular solute-binding protein family 1  22.03 
 
 
452 aa  67.8  0.0000000004  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2502  extracellular solute-binding protein family 1  24.48 
 
 
493 aa  67.4  0.0000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  25.88 
 
 
406 aa  67  0.0000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_009636  Smed_2315  extracellular solute-binding protein  26.04 
 
 
455 aa  67  0.0000000006  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.271919 
 
 
-
 
NC_011831  Cagg_0729  extracellular solute-binding protein family 1  23.8 
 
 
443 aa  66.2  0.000000001  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0000254304  normal 
 
 
-
 
NC_011899  Hore_09490  extracellular solute-binding protein family 1  23.75 
 
 
424 aa  65.9  0.000000001  Halothermothrix orenii H 168  Bacteria  unclonable  2.48456e-16  n/a   
 
 
-
 
NC_009429  Rsph17025_3651  hypothetical protein  22.46 
 
 
437 aa  65.1  0.000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.943877  normal  0.0762923 
 
 
-
 
NC_011898  Ccel_0998  extracellular solute-binding protein family 1  23.39 
 
 
451 aa  65.5  0.000000002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1184  ABC transporter, substrate-binding protein  20.86 
 
 
413 aa  64.7  0.000000003  Burkholderia pseudomallei 1710b  Bacteria  normal  0.186568  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2818  carbohydrate ABC transporter periplasmic binding protein  21.39 
 
 
399 aa  64.7  0.000000003  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_5435  extracellular solute-binding protein  27.03 
 
 
414 aa  64.7  0.000000003  Burkholderia phymatum STM815  Bacteria  normal  normal  0.207139 
 
 
-
 
NC_009664  Krad_0385  extracellular solute-binding protein family 1  21.08 
 
 
410 aa  64.7  0.000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0390662 
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  24 
 
 
420 aa  63.2  0.000000008  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  21.75 
 
 
414 aa  63.2  0.000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  21.92 
 
 
454 aa  62.8  0.00000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_3304  extracellular solute-binding protein family 1  21.81 
 
 
431 aa  62.4  0.00000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010676  Bphyt_5887  extracellular solute-binding protein family 1  24.5 
 
 
412 aa  62  0.00000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4662  extracellular solute-binding protein family 1  23.9 
 
 
417 aa  62.4  0.00000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.917353 
 
 
-
 
NC_011988  Avi_5736  ABC transporter, substrate-binding protein  21.68 
 
 
410 aa  61.6  0.00000002  Agrobacterium vitis S4  Bacteria  normal  0.214535  n/a   
 
 
-
 
NC_008698  Tpen_1055  extracellular solute-binding protein  23.12 
 
 
418 aa  62.4  0.00000002  Thermofilum pendens Hrk 5  Archaea  normal  0.404897  n/a   
 
 
-
 
NC_009523  RoseRS_0803  extracellular solute-binding protein  21.93 
 
 
435 aa  61.6  0.00000002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1174  extracellular solute-binding protein  21.49 
 
 
455 aa  62.4  0.00000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.273661  normal  0.401546 
 
 
-
 
NC_012848  Rleg_4751  extracellular solute-binding protein family 1  22.96 
 
 
417 aa  60.8  0.00000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.137656  normal  0.378465 
 
 
-
 
NC_011368  Rleg2_4984  extracellular solute-binding protein family 1  22.42 
 
 
428 aa  60.8  0.00000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
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