| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4017 |
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| Symbol | |
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| ID | 5318826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 473294 |
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| End bp | 474601 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640775825 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001312758 |
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| Protein GI | 150376162 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCATC ACTTCATGGG CGGCAGTGCT TGGCCGCAGG GAAATGGGGA GGACATCGTG
AGGCTGAAAC GTCTTCTGAT CGCCGGCGCC GCTGCCGCTC TGGCAGCAAT GCCGGCTTCC
GCCGGAGAGC TTTCGTTCTG GCACGCTTAT GCGGGTCAGC AGGACAAGGT CGAATTCATC
GACTTCGCTC TCGGCGAATT CGCAAAGGCC CATCCCGAGG TCAAGCTCGA AGTGGTCGCT
GCCGAGCAAT CGGCCTACAA GACGAAGCTC AACACCGCCA TGGCCTCGGG CAATCCTCCG
GATGTCTTCT ACACGCTGCC TGGCGGCTTC CTGAACGCCT TCGTCAAAGG CGGGCAGATG
TATGCCCTGG ACGAGGAACT CGCCAGGGAC GGGTGGCGTG ACAGTTTCCT TGAAAGCGCA
ATCTCCCAGA CCAGCAAGGA CGGTCACACC TATGCCGTCC CCGTAGACGT GGATTCGGTG
GTGTTCTGGT ACGACAAGGC CCGTTTCGCC GAGAACGGCT GGACGGTGCC GAAGACCTAT
GAAGAGCTGC TCGCCCTCGC CGAGAAGGTG AAAGGTGAAG GGCTTGTCCC CTTTTCGCTC
GGCAACAAGG ATTCCTGGCC GGCAACGTTC TGGTTCCAGT ATCTCGAAAT GCGGCTCAAG
GGCTCGGGCG TCGTCTCGGC TTTCGTGAAC GGGGATCCGG ATGCGACGCT GGGCGCCGAG
GCGACGAAGG CGATGGAGAA GCTCGCCGAA CTCGCGAAGC AAGAGTATTT CCCGATCGGA
TTCAACGGCA TGAGCGATCA GGAAGCCAAT ATGCTCTTCC TCAACGGTCA GGCTGCAATG
ATGCTGAACG GCACGTGGCA GATAGGCGCA TCGGCGGACG CGCCCGAAGG CTTCGAGCTT
GGCTATTTCG CCTTCCCCGC TGTCGCAGGC GGGGCCGGGG ACCAGTCCGA CGTGCTGGCC
GGCGTCGCTG CGAGTTTCGG CGTTTCGCAG AAGGCGGAGA ATAAGGCAGA CGCGGTCACC
CTGCTGAAGT TCCTGACCTC GCGCGAGGTG ATGACCAAAT ATGTCGAGTT GCGCAAGACG
ATGGTGACCG TCAAGGACGC CACCACCGAA ACGGCCGCCG GGCCAGTCCT CTACGATATC
AGCAACAAGC TGATGAAGGC TGCCGGCCAC CTCGATCCTT TCTACGACAC CGCCATGCCG
CCCGCAGCGA CGAACATCTA TTACACCTCG CTGCAAGGAG TGCTCGATGG CTCGCTGCCG
CCCGCGGATG CGGCCAAGCG CATCGAAGAC GCATTGCGGG CGAAGTAA
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| Protein sequence | MWHHFMGGSA WPQGNGEDIV RLKRLLIAGA AAALAAMPAS AGELSFWHAY AGQQDKVEFI
DFALGEFAKA HPEVKLEVVA AEQSAYKTKL NTAMASGNPP DVFYTLPGGF LNAFVKGGQM
YALDEELARD GWRDSFLESA ISQTSKDGHT YAVPVDVDSV VFWYDKARFA ENGWTVPKTY
EELLALAEKV KGEGLVPFSL GNKDSWPATF WFQYLEMRLK GSGVVSAFVN GDPDATLGAE
ATKAMEKLAE LAKQEYFPIG FNGMSDQEAN MLFLNGQAAM MLNGTWQIGA SADAPEGFEL
GYFAFPAVAG GAGDQSDVLA GVAASFGVSQ KAENKADAVT LLKFLTSREV MTKYVELRKT
MVTVKDATTE TAAGPVLYDI SNKLMKAAGH LDPFYDTAMP PAATNIYYTS LQGVLDGSLP
PADAAKRIED ALRAK
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