Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2115 |
Symbol | |
ID | 7310813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2477197 |
End bp | 2478495 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643609049 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002506440 |
Protein GI | 220929531 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.845793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGCT TAAAAAAACT TTTATGTTTA GTACTATTTA CACTAGTAAG TATAATATCA GTTTCTTGCA GCAGTGACAA TTCGTATGTT TCAAATGCTC GTAACAGCAA AACTACTCAG GCTGAAACCA GTACAATAAG TTTAATGACA AGTTGGGGAG GTGTTGATAG TAAAGCCGGC TGCTTGATGG ATTTGCTTGA TAGATTTGAA AATGGAAATC CATCTATAAA AGTTTCTAAT CAATCTATTT TTGGAGACGA ATATCTACCT ACTCTTAAAA CCAGGTTTGC ATCAGGAAAT GAACCCGATG TTTTCGGATT ATGGCCATGT TCGGATATAA AGTATATGAT CATGGCAAAT AAGCTTGCTG ACCTGACGGA CATGCTTACG AAAGACAGTG AGTGGATGGA TAGCTTTAAG GGAAATTACT TTGACTTGAC TACCTATAAC AACAGGATAT ATGGGATACC TTTTGAGCTT GTATTTGAAG GGATGTTTAT TAATAAGGAC TTATTTCAGC AATTTAATGT AAAAATACCT CAAAACTATG AGGAGCTTAA AAACGCTATA AATATCTTTA ATAAACATAA TATAACGCCT ATAGCCTATA ATGCTACCGC CGAAGGTTCA TATATATATC AGAATATGAT TGCCAGTCTA GGCGGCAATG ATGGAGTAGA AAATTATATG GTTAATAACC AGATAAACAA ATGTTATATT GATGCTATGA AGTATATGAA GGAACTTCAC AAGATGCATG CATTTCCGAC TGATTTAATC TCTATTACCA GCGAAGAAAG AAACAACCTT TTTATAAAAA AACAGGCAGC CATGATAGTT CAGGGTTCAT GGTTTGCAGC ATACTTCGGA AAGTTTGATA AGACTGTTGA GATGATACCT TTTCCGTCCA TGGGAAATGG AAACAGAAAA ATACCAGCAG GTTTAGGCGG GGGAACCTTT TATATAAGTA AAAGTGCCTG GGGTACACCC AATAGCAAAG AAAATACCGT AAAACTTTTG AAATTCCTTA CGTCAAAAGA GACATCAGAT TATTTATACA AGGAATCCGG CCTATTCAGC ACACTAAATA TATCAAGGGA AACCCCTTTT AATGCATTGG CAAAACAAAG TATAGATATA TATGAGAATA CTCCTGAACA AGACCGGTGT GCAATCCCTG ATCATGTTAT AGATAGAAGT ACTTGGGAAA AAATTATTGT CAAGGAGTTT CCAGATTATC TTGATGATAA AATATCTGCG GAACAAATAT GGGAAAAAGC ATTAGACAAA TTGCAGTAA
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Protein sequence | MQSLKKLLCL VLFTLVSIIS VSCSSDNSYV SNARNSKTTQ AETSTISLMT SWGGVDSKAG CLMDLLDRFE NGNPSIKVSN QSIFGDEYLP TLKTRFASGN EPDVFGLWPC SDIKYMIMAN KLADLTDMLT KDSEWMDSFK GNYFDLTTYN NRIYGIPFEL VFEGMFINKD LFQQFNVKIP QNYEELKNAI NIFNKHNITP IAYNATAEGS YIYQNMIASL GGNDGVENYM VNNQINKCYI DAMKYMKELH KMHAFPTDLI SITSEERNNL FIKKQAAMIV QGSWFAAYFG KFDKTVEMIP FPSMGNGNRK IPAGLGGGTF YISKSAWGTP NSKENTVKLL KFLTSKETSD YLYKESGLFS TLNISRETPF NALAKQSIDI YENTPEQDRC AIPDHVIDRS TWEKIIVKEF PDYLDDKISA EQIWEKALDK LQ
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