| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0616 |
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| Symbol | |
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| ID | 8324776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 678688 |
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| End bp | 679986 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644941157 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003098425 |
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| Protein GI | 256374765 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGGC CCACGCCCCA GCGGTCCCCC CGATTAGGCC GTCGCGCCGT GCTGCGCGCG
CTCGCGCTCG GAGCGGGGGT GAGCGCGGCG CCCGGACTCG TCGGGTGCGG CGGCGACCCC
GGCGGCGCGT CGGCGGACGT CGTGACGTTC GGCAACAACC AGTCCGACCC GGTGCCGAAG
GACGCGATCA CGGCGGTGCT GAAGTCGTTC GAGGGCTCCT CCGGGCTGAG CGTGCGGATC
AACACCAAGC AGCACGAGCA GTACCAGGAG CAGATCAACA ACTACCTGCA GGGCAGGCCG
GACGACGTGC TGTCCTGGTT CTCCGGCTAC CGCATGAGGT TCTTCGCCGA GCAGGGCCTC
ACCGGCGACC TGTCGGACGT GTGGGCCAAG GTCGGCTCCG GCTTCTCCCC CGCCGTCAAG
GAGGCCGCGA CGGCGGCGGA CGGCAAGCAG CACCTGGTGC CGTTCACCCA GTACCCGTGG
GGGATGTTCT ACCGGCCGAG CCTGTGGCGG CAGCGCGGGT ACACCCCGCC GGGCACGCTC
GACGAGCTGG TCGCGCTGGC CACCAGGATG AAGGCGGACG GGCTCGCGCC GATCGCGTTC
GCGCAGAAGC AGGGCTGGCC CGCGATGGGC ACGTTCGACC AGCTGAACTT CCGGGTCAAC
GGCTACCGGT TCCACGTGGA CCTGATGGCG GGCCAGGAGG ACTGGCAGGG GCCTCGGGTG
CGGGAGGTGT TCGACACCTG GAAGCGGCTG CTGCCGTTCC AGCAGGAGAA CGCGCTCGGC
CGCGACTGGC AGGAGGCCGC CCAGTCACTC CAGCGCGGCG AGGCCGGGAT GTACCTGCTC
GGCTCGTTCC TGGCCCAGCA GTTCACCGGC GCGGACCGGG ACGACCTGGA CTTCTTCCCG
TTCCCCGAGG TGAACCCCGA GTTCGGCACC GACACCGTCG AGGCGCCCAT CGACGGCTTC
ATGCTCTCCC GCGAGCCCGG CAACCCCGAC GGGGCGCGGA AGCTGCTGGA GCACCTGGCG
TCGCCGCAGG CGCAGCTGGC CTACCTGAAG GCCGACCCGA CGACCGTGGC GACCAGCACC
GGGGTCGACG TGAGCGGGTA CACCCCGTTG CAGCGCAAGG CCGCCGAGGT GATCGCCTCG
GCCGCGCACA TCACCCAGTT CCTCGACCGG GACACCGATC CCCGGTTCGC CAGCGACGCG
GCGACCAACG GGCTGACCGC GTTCCTGTCC GAGCCCGGCG ACGTGGACTC GGTGCTGCGC
GGGATGGCGG AGCAGGCCAA GACCATCTTC TCGGAGTGA
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| Protein sequence | MSRPTPQRSP RLGRRAVLRA LALGAGVSAA PGLVGCGGDP GGASADVVTF GNNQSDPVPK
DAITAVLKSF EGSSGLSVRI NTKQHEQYQE QINNYLQGRP DDVLSWFSGY RMRFFAEQGL
TGDLSDVWAK VGSGFSPAVK EAATAADGKQ HLVPFTQYPW GMFYRPSLWR QRGYTPPGTL
DELVALATRM KADGLAPIAF AQKQGWPAMG TFDQLNFRVN GYRFHVDLMA GQEDWQGPRV
REVFDTWKRL LPFQQENALG RDWQEAAQSL QRGEAGMYLL GSFLAQQFTG ADRDDLDFFP
FPEVNPEFGT DTVEAPIDGF MLSREPGNPD GARKLLEHLA SPQAQLAYLK ADPTTVATST
GVDVSGYTPL QRKAAEVIAS AAHITQFLDR DTDPRFASDA ATNGLTAFLS EPGDVDSVLR
GMAEQAKTIF SE
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