Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_2696 |
Symbol | |
ID | 4073927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008010 |
Strand | + |
Start bp | 332244 |
End bp | 333506 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641228780 |
Product | extracellular solute-binding protein |
Protein accession | YP_594203 |
Protein GI | 94972163 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.240659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA TCCGGCTTAC TGTTCTGACC GCCCTGCTGA CCGGCAGCAC CCTGGCACAG GGGCAAACCA CCATCGACCT GTGGCATATC CAAACGACCG ACAACGGCAA GAAGATCATT CAGGACGCCG TGAACCGCTT CGAAAAGGCT AATCCCGGCA TCAAAGTCAA CGTCACCCCC ACCCAGAACG ACGCCTACAA GAGCAAGCTC AAGATCGCCG TTGGTGCAGG CAATGCACCC TGCGTCTTTA TGTCCTGGGG CGGCGGCCCG CTGTACGAGT ACATCAAGTC GAACCAGGTG CTTGACCTCA CCCCCTACCT CGACGAGAAC GCGGCCTTTA AGAACCGCAT TCTGCCCGCC GCATGGAGTT CAGTCACTTT TAATGGCCAT ATCTACGGCA TCCCCGCCGA AAACACCGCT GTCGCCGTCG TCCTGTACAA CAAGGAGCTG TTCGCCAAGT ACGGCCTCAA ACCGCCCAAA ACCTGGAACG ACCTGATGAA CGTGGTCGCC ACCTTGAAGA AGAACAACAT TGCAGCCTTC TCGCTCGCCA ACAAGGCGAA GTGGCCCGGC AGCATGTTCT ACGCCTACCT GGTGGACCGG ATTGGCGGCC CGAGTGTCTT TAAGAACGCG GCCCTACGTC AGAATGGCGG CAGCTTCACG GACCCCGCTT TTATCAAGGC CGGGCAGATG GTGCAGGATC TCGTGAAGGC CGGGGCCTTT GTGCAGGGCT ACAATGGCCT GGACTACGAC AGCGGCGCGT CCCGTCAGCT GCTCTACTCG GGCCGGGCGG CGATGGAGCT GATGGGCACC TGGGAACTGG GCACCATCAA GAACGAAAAC CCCGAGTTCC TGAAGAAGGT GGACTTCTTC CCCTTCCCCT CAGTGCCGGG CGGCAAGGGT AACCCCAATG CGGTGTTGGG CACCGTCGGC GACAACTTCT ACAGCATCTC GAAGTCGTGT AAGAACCCCG ACGCGGCTTT CAAGCTGCTG ACGTACCTGA TCGATGACCA GGCGGCGCAG GCCCGGGTGG CGGACAACCG CCTGCCGCCC GTCAAGAACT TGAAGGTCAC CGATCCCCTC CTGAAGCGCA TTCAGGCGTT TGTCAGCAAG GCGCCCAGCG TGCAGCTCTG GTACGACCAG GAATTGCCGC CCCAGCTCGG GGAGTTGCAC AAGGACACCA GCCAGGCGCT CCTCGGCCTG ACAATCACCC CGCAGACCGC CGCGAGCCAG ATGGAGACGC TGGCGAAGAA GCTGCTGAAG TAG
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Protein sequence | MKKIRLTVLT ALLTGSTLAQ GQTTIDLWHI QTTDNGKKII QDAVNRFEKA NPGIKVNVTP TQNDAYKSKL KIAVGAGNAP CVFMSWGGGP LYEYIKSNQV LDLTPYLDEN AAFKNRILPA AWSSVTFNGH IYGIPAENTA VAVVLYNKEL FAKYGLKPPK TWNDLMNVVA TLKKNNIAAF SLANKAKWPG SMFYAYLVDR IGGPSVFKNA ALRQNGGSFT DPAFIKAGQM VQDLVKAGAF VQGYNGLDYD SGASRQLLYS GRAAMELMGT WELGTIKNEN PEFLKKVDFF PFPSVPGGKG NPNAVLGTVG DNFYSISKSC KNPDAAFKLL TYLIDDQAAQ ARVADNRLPP VKNLKVTDPL LKRIQAFVSK APSVQLWYDQ ELPPQLGELH KDTSQALLGL TITPQTAASQ METLAKKLLK
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