More than 300 homologs were found in PanDaTox collection
for query gene Amir_7010 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_7010  short-chain dehydrogenase/reductase SDR  100 
 
 
302 aa  605  9.999999999999999e-173  Actinosynnema mirum DSM 43827  Bacteria  normal  0.126054  n/a   
 
 
-
 
NC_013159  Svir_23700  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  56.77 
 
 
315 aa  342  5.999999999999999e-93  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.256635 
 
 
-
 
NC_013510  Tcur_3646  short-chain dehydrogenase/reductase SDR  58.22 
 
 
308 aa  322  6e-87  Thermomonospora curvata DSM 43183  Bacteria  normal  0.570438  n/a   
 
 
-
 
NC_009953  Sare_0102  short-chain dehydrogenase/reductase SDR  55.48 
 
 
304 aa  313  2.9999999999999996e-84  Salinispora arenicola CNS-205  Bacteria  normal  0.440904  hitchhiker  0.000946553 
 
 
-
 
NC_009972  Haur_3090  short-chain dehydrogenase/reductase SDR  52.61 
 
 
293 aa  310  2e-83  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.57979  n/a   
 
 
-
 
NC_013595  Sros_3383  short chain dehydrogenase  57.86 
 
 
298 aa  308  1.0000000000000001e-82  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.479442 
 
 
-
 
NC_014212  Mesil_2684  short-chain dehydrogenase/reductase SDR  54.36 
 
 
307 aa  305  6e-82  Meiothermus silvanus DSM 9946  Bacteria  normal  0.122306  normal 
 
 
-
 
NC_013946  Mrub_0336  short-chain dehydrogenase/reductase SDR  54.11 
 
 
304 aa  297  1e-79  Meiothermus ruber DSM 1279  Bacteria  normal  0.607685  normal 
 
 
-
 
NC_013595  Sros_3979  short chain dehydrogenase  54.1 
 
 
304 aa  296  4e-79  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0555299  normal 
 
 
-
 
NC_007333  Tfu_1242  short chain dehydrogenase  55.59 
 
 
308 aa  293  2e-78  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0581  short chain dehydrogenase  56.9 
 
 
303 aa  291  8e-78  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.952569  n/a   
 
 
-
 
NC_009380  Strop_4136  short chain dehydrogenase  52.94 
 
 
304 aa  291  9e-78  Salinispora tropica CNB-440  Bacteria  normal  0.210965  normal 
 
 
-
 
NC_012850  Rleg_1029  short chain dehydrogenase  53.02 
 
 
304 aa  291  1e-77  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0897  short chain dehydrogenase  54.64 
 
 
304 aa  290  2e-77  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2287  short-chain dehydrogenase/reductase SDR  58.27 
 
 
303 aa  289  3e-77  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_0585  short chain dehydrogenase  55.86 
 
 
314 aa  284  1.0000000000000001e-75  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0043  short-chain dehydrogenase/reductase SDR  53.11 
 
 
309 aa  284  1.0000000000000001e-75  Conexibacter woesei DSM 14684  Bacteria  normal  0.591318  normal  0.770282 
 
 
-
 
NC_009953  Sare_2412  short-chain dehydrogenase/reductase SDR  56.99 
 
 
303 aa  282  5.000000000000001e-75  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.330008 
 
 
-
 
NC_008541  Arth_0371  short chain dehydrogenase  52.13 
 
 
305 aa  279  4e-74  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0551  short chain dehydrogenase  56.9 
 
 
303 aa  276  3e-73  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.387697  n/a   
 
 
-
 
NC_013947  Snas_3030  short-chain dehydrogenase/reductase SDR  50 
 
 
305 aa  276  4e-73  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.303989  normal 
 
 
-
 
NC_013159  Svir_36450  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  50.82 
 
 
304 aa  275  5e-73  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.907148 
 
 
-
 
NC_009675  Anae109_0592  short chain dehydrogenase  51.97 
 
 
303 aa  274  1.0000000000000001e-72  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0246  short chain dehydrogenase  52.63 
 
 
351 aa  268  1e-70  Frankia sp. EAN1pec  Bacteria  normal  0.153805  normal  0.728482 
 
 
-
 
NC_009380  Strop_2046  glucose/ribitol dehydrogenase  54.08 
 
 
550 aa  261  6.999999999999999e-69  Salinispora tropica CNB-440  Bacteria  normal  0.164018  normal 
 
 
-
 
NC_009953  Sare_2123  short-chain dehydrogenase/reductase SDR  53.06 
 
 
304 aa  259  3e-68  Salinispora arenicola CNS-205  Bacteria  normal  0.0115254  normal  0.127014 
 
 
-
 
NC_008146  Mmcs_2751  short chain dehydrogenase  48.14 
 
 
307 aa  240  2e-62  Mycobacterium sp. MCS  Bacteria  normal  0.424079  n/a   
 
 
-
 
NC_008705  Mkms_2795  short chain dehydrogenase  48.14 
 
 
307 aa  240  2e-62  Mycobacterium sp. KMS  Bacteria  normal  0.145594  normal 
 
 
-
 
NC_014158  Tpau_1937  short-chain dehydrogenase/reductase SDR  47.8 
 
 
308 aa  240  2e-62  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_2781  short chain dehydrogenase  48.14 
 
 
307 aa  240  2e-62  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_2570  short-chain dehydrogenase/reductase SDR  43.01 
 
 
298 aa  196  3e-49  Variovorax paradoxus S110  Bacteria  normal  0.596846  n/a   
 
 
-
 
NC_003910  CPS_3727  short chain dehydrogenase/reductase family oxidoreductase  34.75 
 
 
279 aa  160  3e-38  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0378  short-chain dehydrogenase/reductase SDR  37.46 
 
 
291 aa  140  1.9999999999999998e-32  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_3074  short-chain dehydrogenase/reductase SDR  36.11 
 
 
324 aa  140  3e-32  Cyanothece sp. PCC 8802  Bacteria  normal  0.0229278  normal  0.993733 
 
 
-
 
NC_011726  PCC8801_3048  short-chain dehydrogenase/reductase SDR  35.76 
 
 
324 aa  140  3.9999999999999997e-32  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_3687  short-chain dehydrogenase/reductase SDR  35.9 
 
 
286 aa  139  4.999999999999999e-32  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3903  short-chain dehydrogenase/reductase SDR  34.69 
 
 
283 aa  138  1e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1508  Short-chain dehydrogenase/reductase SDR  35.77 
 
 
288 aa  133  3e-30  Burkholderia sp. 383  Bacteria  normal  0.316144  normal  0.580849 
 
 
-
 
NC_010172  Mext_3611  short-chain dehydrogenase/reductase SDR  33.67 
 
 
287 aa  132  7.999999999999999e-30  Methylobacterium extorquens PA1  Bacteria  normal  0.447162  normal 
 
 
-
 
NC_010725  Mpop_4290  short-chain dehydrogenase/reductase SDR  35.59 
 
 
283 aa  130  3e-29  Methylobacterium populi BJ001  Bacteria  normal  0.850912  normal  0.934424 
 
 
-
 
NC_010511  M446_2372  short-chain dehydrogenase/reductase SDR  35.31 
 
 
290 aa  128  9.000000000000001e-29  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3827  short-chain dehydrogenase/reductase SDR  36.01 
 
 
280 aa  127  3e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2630  short-chain dehydrogenase/reductase SDR  30.99 
 
 
322 aa  126  4.0000000000000003e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.067703  normal 
 
 
-
 
NC_011676  PHATRDRAFT_12303  predicted protein  31.56 
 
 
334 aa  126  5e-28  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_007347  Reut_A1549  Short-chain dehydrogenase/reductase SDR  36.13 
 
 
288 aa  119  4.9999999999999996e-26  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3334  short-chain dehydrogenase/reductase SDR  34.77 
 
 
287 aa  119  6e-26  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0183767 
 
 
-
 
NC_011894  Mnod_2839  short-chain dehydrogenase/reductase SDR  35.66 
 
 
284 aa  116  6e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.810748  n/a   
 
 
-
 
NC_007413  Ava_4906  Short-chain dehydrogenase/reductase SDR  31.27 
 
 
327 aa  113  3e-24  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.499645 
 
 
-
 
NC_009338  Mflv_1260  short-chain dehydrogenase/reductase SDR  34.33 
 
 
286 aa  107  3e-22  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.838169  normal  0.0136631 
 
 
-
 
NC_008146  Mmcs_4935  short-chain dehydrogenase/reductase SDR  32.62 
 
 
287 aa  106  4e-22  Mycobacterium sp. MCS  Bacteria  normal  0.838835  n/a   
 
 
-
 
NC_008705  Mkms_5023  short-chain dehydrogenase/reductase SDR  32.62 
 
 
287 aa  106  4e-22  Mycobacterium sp. KMS  Bacteria  normal  0.422551  normal 
 
 
-
 
NC_009077  Mjls_5316  short-chain dehydrogenase/reductase SDR  32.62 
 
 
287 aa  106  4e-22  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3660  short-chain dehydrogenase/reductase SDR  30.21 
 
 
291 aa  95.9  7e-19  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.977972  n/a   
 
 
-
 
NC_007760  Adeh_3160  short-chain dehydrogenase/reductase SDR  34.67 
 
 
248 aa  90.1  4e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.328176  n/a   
 
 
-
 
NC_013441  Gbro_0770  short-chain dehydrogenase/reductase SDR  29.39 
 
 
277 aa  87.4  3e-16  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3565  short-chain dehydrogenase/reductase SDR  32.71 
 
 
244 aa  85.1  0.000000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3817  3-oxoacyl-(acyl-carrier-protein) reductase  29.34 
 
 
247 aa  84  0.000000000000003  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.00000000000000217117  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0187  short-chain dehydrogenase/reductase SDR  27.97 
 
 
259 aa  82.4  0.000000000000009  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.978165  n/a   
 
 
-
 
NC_008146  Mmcs_0298  short-chain dehydrogenase/reductase SDR  30.15 
 
 
270 aa  82.4  0.000000000000009  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0308  short-chain dehydrogenase/reductase SDR  30.15 
 
 
270 aa  82.4  0.000000000000009  Mycobacterium sp. KMS  Bacteria  normal  normal  0.202021 
 
 
-
 
NC_009077  Mjls_0289  short-chain dehydrogenase/reductase SDR  30.15 
 
 
270 aa  82.4  0.000000000000009  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2966  short-chain dehydrogenase/reductase SDR  31.53 
 
 
254 aa  82  0.00000000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.437274  normal  0.59964 
 
 
-
 
NC_007413  Ava_3764  3-ketoacyl-(acyl-carrier-protein) reductase  27.92 
 
 
251 aa  80.9  0.00000000000002  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.0000212417  normal  0.0482294 
 
 
-
 
NC_011884  Cyan7425_1782  3-ketoacyl-(acyl-carrier-protein) reductase  28.96 
 
 
244 aa  81.3  0.00000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.788783  normal 
 
 
-
 
NC_008148  Rxyl_2393  3-ketoacyl-(acyl-carrier-protein) reductase  30.77 
 
 
247 aa  80.1  0.00000000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.114782  n/a   
 
 
-
 
NC_013411  GYMC61_1802  gluconate 5-dehydrogenase  30.77 
 
 
260 aa  80.1  0.00000000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010625  Bphy_6999  short-chain dehydrogenase/reductase SDR  31.94 
 
 
255 aa  79.7  0.00000000000005  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_2284  short-chain dehydrogenase/reductase SDR  30.4 
 
 
259 aa  79.7  0.00000000000006  Natrialba magadii ATCC 43099  Archaea  normal  0.496594  n/a   
 
 
-
 
NC_009511  Swit_1426  short-chain dehydrogenase/reductase SDR  31.75 
 
 
254 aa  79.3  0.00000000000007  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0198421 
 
 
-
 
NC_010512  Bcenmc03_6424  short-chain dehydrogenase/reductase SDR  30.55 
 
 
255 aa  79.3  0.00000000000007  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0368  short-chain dehydrogenase/reductase SDR  32.22 
 
 
248 aa  79  0.00000000000009  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2119  short-chain dehydrogenase/reductase SDR  29.18 
 
 
257 aa  78.6  0.0000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_3438  3-ketoacyl-(acyl-carrier-protein) reductase  28.5 
 
 
252 aa  79  0.0000000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_3255  short-chain dehydrogenase/reductase SDR  30.74 
 
 
250 aa  78.6  0.0000000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2884  short-chain dehydrogenase/reductase SDR  32.34 
 
 
295 aa  78.6  0.0000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.114191  normal 
 
 
-
 
NC_011370  Rleg2_6281  short-chain dehydrogenase/reductase SDR  31.19 
 
 
264 aa  77.8  0.0000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.616501 
 
 
-
 
NC_007511  Bcep18194_B1490  Short-chain dehydrogenase/reductase SDR  33.99 
 
 
309 aa  78.2  0.0000000000002  Burkholderia sp. 383  Bacteria  normal  0.173675  normal  0.186298 
 
 
-
 
NC_012850  Rleg_1562  short-chain dehydrogenase/reductase SDR  32 
 
 
248 aa  77.4  0.0000000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0163014 
 
 
-
 
NC_009954  Cmaq_0869  short-chain dehydrogenase/reductase SDR  31 
 
 
278 aa  77.4  0.0000000000003  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
NC_013501  Rmar_2036  short-chain dehydrogenase/reductase SDR  30.88 
 
 
258 aa  77  0.0000000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6333  short-chain dehydrogenase/reductase SDR  30.91 
 
 
252 aa  77.4  0.0000000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  0.519755  normal 
 
 
-
 
NC_013730  Slin_2186  short-chain dehydrogenase/reductase SDR  26.21 
 
 
248 aa  77  0.0000000000003  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0361624 
 
 
-
 
NC_012793  GWCH70_0926  gluconate 5-dehydrogenase  28.18 
 
 
259 aa  76.6  0.0000000000004  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1150  Short-chain dehydrogenase/reductase SDR  29.65 
 
 
253 aa  76.6  0.0000000000005  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.718772 
 
 
-
 
NC_011662  Tmz1t_2326  3-ketoacyl-(acyl-carrier-protein) reductase  30.92 
 
 
249 aa  76.6  0.0000000000005  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_2192  short-chain dehydrogenase/reductase SDR  27.48 
 
 
256 aa  76.6  0.0000000000005  Spirosoma linguale DSM 74  Bacteria  normal  hitchhiker  0.0046226 
 
 
-
 
NC_014210  Ndas_1303  short-chain dehydrogenase/reductase SDR  34.3 
 
 
243 aa  75.9  0.0000000000007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B2870  3-oxoacyl-[acyl-carrier-protein] reductase  29.77 
 
 
254 aa  76.3  0.0000000000007  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5303  short-chain dehydrogenase/reductase SDR  31.37 
 
 
244 aa  75.5  0.0000000000009  Mycobacterium sp. MCS  Bacteria  normal  0.0663055  n/a   
 
 
-
 
NC_008705  Mkms_5392  short-chain dehydrogenase/reductase SDR  31.37 
 
 
244 aa  75.5  0.0000000000009  Mycobacterium sp. KMS  Bacteria  normal  0.932372  normal  0.125579 
 
 
-
 
NC_010184  BcerKBAB4_1705  short chain dehydrogenase  28.57 
 
 
252 aa  75.5  0.000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.957083  n/a   
 
 
-
 
NC_011892  Mnod_8333  short-chain dehydrogenase/reductase SDR  28.57 
 
 
257 aa  75.5  0.000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.319832  n/a   
 
 
-
 
NC_007517  Gmet_2059  3-oxoacyl-[acyl-carrier-protein] reductase  30.81 
 
 
247 aa  75.5  0.000000000001  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.0884699 
 
 
-
 
NC_013158  Huta_1017  short-chain dehydrogenase/reductase SDR  31.58 
 
 
245 aa  75.5  0.000000000001  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_009077  Mjls_5682  short-chain dehydrogenase/reductase SDR  31.37 
 
 
239 aa  75.5  0.000000000001  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3600  short-chain dehydrogenase/reductase SDR  36.76 
 
 
287 aa  75.1  0.000000000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.181549  n/a   
 
 
-
 
NC_010581  Bind_1480  short-chain dehydrogenase/reductase SDR  29.05 
 
 
250 aa  75.5  0.000000000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.228128  normal 
 
 
-
 
NC_013501  Rmar_1167  short-chain dehydrogenase/reductase SDR  30.24 
 
 
252 aa  74.3  0.000000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_0878  short chain dehydrogenase  28.44 
 
 
261 aa  74.7  0.000000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.787197  normal 
 
 
-
 
NC_008009  Acid345_0026  short-chain dehydrogenase/reductase SDR  27.88 
 
 
249 aa  74.3  0.000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.94443  normal 
 
 
-
 
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