| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3660 |
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| Symbol | |
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| ID | 5077808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | - |
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| Start bp | 290253 |
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| End bp | 291128 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640481383 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001166045 |
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| Protein GI | 146275885 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.977972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACA AGCCCAGGAT TGCAATCGTA ACCGGCGCCA GCCGCGGCGC GGGCGCGGGC
ATAGCCCGGG GCTTCGGCGA AATGGGCTAT ACCGTCTACG TGACCGGCCG CACCGTCTCG
CCCGGCAACG CCAAGGGGTG GGACGGCACG GTTCTTCCCG GCACCGTCGC CGAAACCGCG
CAGCGCGTGA CGGAACTTGG CGGCAAGGGC ATTCCGGTGG TCTGCGACCA CGCCGACGAC
GCGCAGGTGG CGCGCCTGTT CGAACAGGTG ATGGACGAGC AGGGCAGGCT CGACGTTCTG
GTCAACAATG CCGCCTACAT GCATCACCAG CTCATCCAGA AGGCACCGTT CTGGGAGAAG
GAACTGGACG CGCAGAAGAT CATCGATGTC GGCCTGCGCA GCGCCTACGT GGCAAGCTGG
CACGCCGCCA GGATCATGGT GCCGCAAGGT TCAGGCGCCA TTGCCATGAC CTCGTCATTC
GGCGCATCGT GCTACATGCA CGGCCCCGCC TATGGCGCGC AGAAGGCCGG GCTCGACAAG
CTGGCGCATG ACATGGAGCA CGATTTCCGC GGCACCGGGG TCATCGCCTT CTCGCTCTGG
CTCGGCCCGC AGCTTACCGA GCGCGCGCAG ATTGCCGCCG AAACCAATCC CGAGCAGTAC
GAGGGCTTCC TCGCGATGGC CGAGAACCCG GAATTTTCCG CCCACGTCAT CGACGCCATC
GACAAGTCCC CCAACCGCGA TCAGCTGTCC GGCGAGACGC TGATCGTGGC CGAGATCGCG
CGCGAACTGG GCGTGACCGA CCGCGGACAC GATCGTCCCT CGCACCGCGA GATGCTGGGC
AGTCCGCGCC CGAAGAACCC CGCCGCCGTC TACTGA
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| Protein sequence | MSDKPRIAIV TGASRGAGAG IARGFGEMGY TVYVTGRTVS PGNAKGWDGT VLPGTVAETA
QRVTELGGKG IPVVCDHADD AQVARLFEQV MDEQGRLDVL VNNAAYMHHQ LIQKAPFWEK
ELDAQKIIDV GLRSAYVASW HAARIMVPQG SGAIAMTSSF GASCYMHGPA YGAQKAGLDK
LAHDMEHDFR GTGVIAFSLW LGPQLTERAQ IAAETNPEQY EGFLAMAENP EFSAHVIDAI
DKSPNRDQLS GETLIVAEIA RELGVTDRGH DRPSHREMLG SPRPKNPAAV Y
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