| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4136 |
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| Symbol | |
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| ID | 5060620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4703804 |
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| End bp | 4704718 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640476398 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001160943 |
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| Protein GI | 145596646 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.210965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTTG ATTTGGCAGG CAAGGTTGCT GTGGTAGCTG GGGCGACTCG CGGTGCGGGG
CGCCAGATTG CCGTGCAGCT TGGTGCCCGC GGGGCGACGG TGTATGCCAC CGGCCGCAGT
ACCCGCGCGC ATCGATCGGA GATGGACCGG TCGGAGACGA TCGAGGAGAC TGCTGAGCTG
GTGACTGCGG CCGGTGGTAG GGGGATCGCT GTCCAGATCG ATCACCTCGT CGCGGAGCAG
GTGCGTGCGC TGGTGGAGCG CGTCGATGCT GAGCAGGGGT GCCTGGACAT CCTGGTCAAC
AACATCTGGG GTGCGGAGCT GTTGTTCAGC TGGGACCAGA AGCTGTGGGA ACACCCCCTG
GAAACCGGCC TGCACATCTT GCGGCTGGCG GTCGATACCC ACGTCATCAC CAGCCACTTC
GCGCTGCCAT TGCTGATCCG CCGACCGGGT GGCTTGGTAG TCGAGATGAC CGACGGCACC
GCGGAGTACA ACCGTACGAA CTACCGGGTG TCGTTCTTCT ACGACCTGGC CAAGACCTCG
GTGCTGCGCA TGGCGTTCGC CCAGGCTCAG GAGCTGGCCT CGTTCGGTGC CACCGCGGTG
GCCCTGACGC CGGGCTGGAT GCGTTCGGAG ATCATGCTGG AGCACTTCGG GGTCACCGAG
GCCAACTGGT ACGACGCCAC GGCCACCGAA CCTCACTTCG CGATTTCGGA GAGCCCCGCC
TTCGTCGGCC GGGCGGTCGC CGCACTCGCG GCCGACCCGG ACATCGCCCG GTGGAACGGG
CAGTCGCTGT CCAGCGGGCA GCTGGCTCAG GTCTACGGCT TCACTGATCT CGACGGTAGT
CGCCCGGACT GCTGGCGGTA CCTGGTCGAG GTCCAGGACG CCGGCAAGCC GGCGGACGTC
ACCGGCTACC GCTGA
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| Protein sequence | MDLDLAGKVA VVAGATRGAG RQIAVQLGAR GATVYATGRS TRAHRSEMDR SETIEETAEL
VTAAGGRGIA VQIDHLVAEQ VRALVERVDA EQGCLDILVN NIWGAELLFS WDQKLWEHPL
ETGLHILRLA VDTHVITSHF ALPLLIRRPG GLVVEMTDGT AEYNRTNYRV SFFYDLAKTS
VLRMAFAQAQ ELASFGATAV ALTPGWMRSE IMLEHFGVTE ANWYDATATE PHFAISESPA
FVGRAVAALA ADPDIARWNG QSLSSGQLAQ VYGFTDLDGS RPDCWRYLVE VQDAGKPADV
TGYR
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