| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0187 |
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| Symbol | |
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| ID | 6331385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 203079 |
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| End bp | 203858 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642656465 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001930386 |
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| Protein GI | 188996135 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.978165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTTAG AAGGAAAGTT GGCATTTGTA ACAGGAGCAA GCAGAGGAAT TGGAAGAGCA
ATAGCTTTAA AATTGGCTTC TATGGGAGCC GATGTAATTA TTAATTACTA TAAAAACAAA
GAAAAGGCTG AAGAAGTCAA ACAAGAGATA GAAAAGCTTG GAAGAAAGTC TTATATAGTT
CAAGGAGATT TTGGAGTTAA GGAAGAGATT GACAGAGTAT TTGATGAAAT CACAGAAAAA
TTTGGCTACT TAGATATTTT TGTAAGCAAC GCAGTAGCAT CAGGAAGAGA AGTAATCGGT
GGTTTTGCAC CATTTTTAAG ACTTAAAGAA AAAGGCACTC TAAGAATATA CAACATAACA
ACCTTTGGTT TTATATGGTC TTCTCAGAGA GCCGTTAAGC TTATGGAAGG AAGAGAAGGA
AAGATTATAG CTATTTCATC AACCGGGACA AGGGATTATA TGCCAAATTA TGCAATACAC
GGTTCAGCAA AGGCAGCATT AGAAACACTT GTTAGATACT TAGCAGTAGA AGTTGGTCCA
ATGGGAATTA ATGTAAACTG TGTATCCGGT GGACCAATAG ATACAGAAGC AATCCAGCTT
TTTCCGAACT ATGAAGAAGT TAAAGAAGGA ACAATCAAGC TAACGCCACT TGGTAGAATG
GGACAGCCGG AAGATTTAGC CGGGGTGGTT GGATTTTTAT GCACTCCGGA TGCAAGATGG
ATACAAGGTC AAACTATAGT AGTTGACGGT GGATTATCTT TAGTTAGGGG TGGAAGATAA
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| Protein sequence | MVLEGKLAFV TGASRGIGRA IALKLASMGA DVIINYYKNK EKAEEVKQEI EKLGRKSYIV
QGDFGVKEEI DRVFDEITEK FGYLDIFVSN AVASGREVIG GFAPFLRLKE KGTLRIYNIT
TFGFIWSSQR AVKLMEGREG KIIAISSTGT RDYMPNYAIH GSAKAALETL VRYLAVEVGP
MGINVNCVSG GPIDTEAIQL FPNYEEVKEG TIKLTPLGRM GQPEDLAGVV GFLCTPDARW
IQGQTIVVDG GLSLVRGGR
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