| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1242 |
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| Symbol | |
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| ID | 3581006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1446231 |
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| End bp | 1447157 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637684939 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_289303 |
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| Protein GI | 72161646 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCACG GAACACCATC CCCGCTCCAC GGAAAAGTCG CTCTCGTCGC CGGAGCCACC
CGGGGCGCGG GCCGGGGAAT CGCGGTCGAA CTCGGCGCCG CCGGAGCCAC GGTCTACGTG
ACAGGGCGTA CCACGCGCAC CCGGCGCTCG GAGTACAACC GCCCTGAAAC CATCGAGGAC
ACCGCCGACC TGGTCACCGC CGCGGGCGGC CACGGCGTTG CGGTGCCAAC CGACCACCTG
GTGCCTGACC AGGTCCGCTC CCTTGTGGAG CGGATCAGTA GCGAACAAGG ACGGCTTGAC
ATCCTCGTCA ACGACGTGTG GGGCGGTGAA CTCCTCTTCG AATGGGATGT GCCTCTTTGG
GAGCACAACC TGGACAACGG CCTGCGGATG CTGCGGCTAG GCGTGGACAC CCACGCCATC
ACCAGCCACT ATGCGCTGCC GCTGCTCTTA CGCCGCCCCG GCGGCCTCGT GGTCGAGGTC
ACCGACGGCA CTGCTGAGTA CAACGGCTCC CATTACCGCA ATTCATTCTT CTATGACCTT
GTCAAAACGG CGGTATTGCG CATGGCCTTT GCCCTCTCCC GCGAGATTGG GCCGCGCGGG
GCGACCGCGG TGGCGGTGAC CCCTGGGTGG CTGCGGTCCG AGCTCATGCT GGACGCCTAC
GGGGTGACGG AGGAGAACTG GCGGGACGCC CTTGCCCAGG AGCCGCACTT CTGCATCTCC
GAGACGCCGC GCTATGTGGG GCGGGCCATT GCTGCCTTGG CCGCTGACCC CGACGTTGCC
CGCTGGAACG GGGCATCCCT GTCCAGCGGG CAATTAGCGC AGGTCTACGG CTTCACCGAC
CTTGACGGCA GCCAGCCGGA TGCCTGGCGG TACCTGGTCG AGGTCCAGGA CGCGGGAAAA
CCTGCTGACC CCACCGGGTA CCGCTAG
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| Protein sequence | MNHGTPSPLH GKVALVAGAT RGAGRGIAVE LGAAGATVYV TGRTTRTRRS EYNRPETIED
TADLVTAAGG HGVAVPTDHL VPDQVRSLVE RISSEQGRLD ILVNDVWGGE LLFEWDVPLW
EHNLDNGLRM LRLGVDTHAI TSHYALPLLL RRPGGLVVEV TDGTAEYNGS HYRNSFFYDL
VKTAVLRMAF ALSREIGPRG ATAVAVTPGW LRSELMLDAY GVTEENWRDA LAQEPHFCIS
ETPRYVGRAI AALAADPDVA RWNGASLSSG QLAQVYGFTD LDGSQPDAWR YLVEVQDAGK
PADPTGYR
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