More than 300 homologs were found in PanDaTox collection
for query gene Tfu_1242 on replicon NC_007333
Organism: Thermobifida fusca YX



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007333  Tfu_1242  short chain dehydrogenase  100 
 
 
308 aa  622  1e-177  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3646  short-chain dehydrogenase/reductase SDR  76.95 
 
 
308 aa  490  1e-137  Thermomonospora curvata DSM 43183  Bacteria  normal  0.570438  n/a   
 
 
-
 
NC_013739  Cwoe_0043  short-chain dehydrogenase/reductase SDR  75.4 
 
 
309 aa  480  1e-134  Conexibacter woesei DSM 14684  Bacteria  normal  0.591318  normal  0.770282 
 
 
-
 
NC_009380  Strop_4136  short chain dehydrogenase  75.33 
 
 
304 aa  468  1.0000000000000001e-131  Salinispora tropica CNB-440  Bacteria  normal  0.210965  normal 
 
 
-
 
NC_011369  Rleg2_0897  short chain dehydrogenase  73.84 
 
 
304 aa  461  1e-129  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_1029  short chain dehydrogenase  72.19 
 
 
304 aa  457  9.999999999999999e-129  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_0592  short chain dehydrogenase  75.17 
 
 
303 aa  458  9.999999999999999e-129  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_0581  short chain dehydrogenase  73.84 
 
 
303 aa  454  1.0000000000000001e-126  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.952569  n/a   
 
 
-
 
NC_011145  AnaeK_0585  short chain dehydrogenase  72.52 
 
 
314 aa  446  1.0000000000000001e-124  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0551  short chain dehydrogenase  74.83 
 
 
303 aa  436  1e-121  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.387697  n/a   
 
 
-
 
NC_009953  Sare_2123  short-chain dehydrogenase/reductase SDR  72.7 
 
 
304 aa  432  1e-120  Salinispora arenicola CNS-205  Bacteria  normal  0.0115254  normal  0.127014 
 
 
-
 
NC_013595  Sros_3979  short chain dehydrogenase  72.19 
 
 
304 aa  427  1e-119  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0555299  normal 
 
 
-
 
NC_009380  Strop_2046  glucose/ribitol dehydrogenase  72.33 
 
 
550 aa  418  1e-116  Salinispora tropica CNB-440  Bacteria  normal  0.164018  normal 
 
 
-
 
NC_008541  Arth_0371  short chain dehydrogenase  68.32 
 
 
305 aa  418  1e-116  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3030  short-chain dehydrogenase/reductase SDR  63.25 
 
 
305 aa  394  1e-108  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.303989  normal 
 
 
-
 
NC_009921  Franean1_0246  short chain dehydrogenase  63.07 
 
 
351 aa  375  1e-103  Frankia sp. EAN1pec  Bacteria  normal  0.153805  normal  0.728482 
 
 
-
 
NC_013159  Svir_36450  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  60.6 
 
 
304 aa  369  1e-101  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.907148 
 
 
-
 
NC_009953  Sare_0102  short-chain dehydrogenase/reductase SDR  64.05 
 
 
304 aa  367  1e-100  Salinispora arenicola CNS-205  Bacteria  normal  0.440904  hitchhiker  0.000946553 
 
 
-
 
NC_009077  Mjls_2781  short chain dehydrogenase  60.87 
 
 
307 aa  352  5e-96  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3383  short chain dehydrogenase  64.55 
 
 
298 aa  349  3e-95  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.479442 
 
 
-
 
NC_008146  Mmcs_2751  short chain dehydrogenase  60.54 
 
 
307 aa  349  3e-95  Mycobacterium sp. MCS  Bacteria  normal  0.424079  n/a   
 
 
-
 
NC_008705  Mkms_2795  short chain dehydrogenase  60.54 
 
 
307 aa  349  3e-95  Mycobacterium sp. KMS  Bacteria  normal  0.145594  normal 
 
 
-
 
NC_014158  Tpau_1937  short-chain dehydrogenase/reductase SDR  59.12 
 
 
308 aa  336  2.9999999999999997e-91  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2287  short-chain dehydrogenase/reductase SDR  63.7 
 
 
303 aa  328  6e-89  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2684  short-chain dehydrogenase/reductase SDR  55.52 
 
 
307 aa  326  3e-88  Meiothermus silvanus DSM 9946  Bacteria  normal  0.122306  normal 
 
 
-
 
NC_009972  Haur_3090  short-chain dehydrogenase/reductase SDR  53.72 
 
 
293 aa  318  6e-86  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.57979  n/a   
 
 
-
 
NC_013946  Mrub_0336  short-chain dehydrogenase/reductase SDR  53.42 
 
 
304 aa  312  3.9999999999999997e-84  Meiothermus ruber DSM 1279  Bacteria  normal  0.607685  normal 
 
 
-
 
NC_009953  Sare_2412  short-chain dehydrogenase/reductase SDR  61.07 
 
 
303 aa  312  5.999999999999999e-84  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.330008 
 
 
-
 
NC_013093  Amir_7010  short-chain dehydrogenase/reductase SDR  55.59 
 
 
302 aa  307  2.0000000000000002e-82  Actinosynnema mirum DSM 43827  Bacteria  normal  0.126054  n/a   
 
 
-
 
NC_013159  Svir_23700  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  52.46 
 
 
315 aa  302  5.000000000000001e-81  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.256635 
 
 
-
 
NC_012791  Vapar_2570  short-chain dehydrogenase/reductase SDR  44.22 
 
 
298 aa  240  2.9999999999999997e-62  Variovorax paradoxus S110  Bacteria  normal  0.596846  n/a   
 
 
-
 
NC_003910  CPS_3727  short chain dehydrogenase/reductase family oxidoreductase  36.14 
 
 
279 aa  174  1.9999999999999998e-42  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3903  short-chain dehydrogenase/reductase SDR  38.98 
 
 
283 aa  172  5e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4290  short-chain dehydrogenase/reductase SDR  40.34 
 
 
283 aa  170  2e-41  Methylobacterium populi BJ001  Bacteria  normal  0.850912  normal  0.934424 
 
 
-
 
NC_010511  M446_2372  short-chain dehydrogenase/reductase SDR  39.86 
 
 
290 aa  167  2.9999999999999998e-40  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3611  short-chain dehydrogenase/reductase SDR  37.97 
 
 
287 aa  166  4e-40  Methylobacterium extorquens PA1  Bacteria  normal  0.447162  normal 
 
 
-
 
NC_008025  Dgeo_0378  short-chain dehydrogenase/reductase SDR  39.46 
 
 
291 aa  163  3e-39  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2839  short-chain dehydrogenase/reductase SDR  39.86 
 
 
284 aa  155  9e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.810748  n/a   
 
 
-
 
NC_010505  Mrad2831_3827  short-chain dehydrogenase/reductase SDR  37.29 
 
 
280 aa  155  1e-36  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3687  short-chain dehydrogenase/reductase SDR  36.59 
 
 
286 aa  150  4e-35  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1508  Short-chain dehydrogenase/reductase SDR  35.82 
 
 
288 aa  145  7.0000000000000006e-34  Burkholderia sp. 383  Bacteria  normal  0.316144  normal  0.580849 
 
 
-
 
NC_008146  Mmcs_4935  short-chain dehydrogenase/reductase SDR  37.72 
 
 
287 aa  145  1e-33  Mycobacterium sp. MCS  Bacteria  normal  0.838835  n/a   
 
 
-
 
NC_008705  Mkms_5023  short-chain dehydrogenase/reductase SDR  37.72 
 
 
287 aa  145  1e-33  Mycobacterium sp. KMS  Bacteria  normal  0.422551  normal 
 
 
-
 
NC_009077  Mjls_5316  short-chain dehydrogenase/reductase SDR  37.72 
 
 
287 aa  145  1e-33  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_3074  short-chain dehydrogenase/reductase SDR  35.79 
 
 
324 aa  140  1.9999999999999998e-32  Cyanothece sp. PCC 8802  Bacteria  normal  0.0229278  normal  0.993733 
 
 
-
 
NC_011726  PCC8801_3048  short-chain dehydrogenase/reductase SDR  35.45 
 
 
324 aa  140  3e-32  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_2630  short-chain dehydrogenase/reductase SDR  32.29 
 
 
322 aa  139  3.9999999999999997e-32  Trichodesmium erythraeum IMS101  Bacteria  normal  0.067703  normal 
 
 
-
 
NC_011676  PHATRDRAFT_12303  predicted protein  33.01 
 
 
334 aa  137  2e-31  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_007413  Ava_4906  Short-chain dehydrogenase/reductase SDR  34.58 
 
 
327 aa  134  1.9999999999999998e-30  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.499645 
 
 
-
 
NC_009511  Swit_3334  short-chain dehydrogenase/reductase SDR  34.04 
 
 
287 aa  133  3.9999999999999996e-30  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0183767 
 
 
-
 
NC_009338  Mflv_1260  short-chain dehydrogenase/reductase SDR  35.4 
 
 
286 aa  129  7.000000000000001e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.838169  normal  0.0136631 
 
 
-
 
NC_007347  Reut_A1549  Short-chain dehydrogenase/reductase SDR  35.21 
 
 
288 aa  124  2e-27  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0770  short-chain dehydrogenase/reductase SDR  32.27 
 
 
277 aa  121  9.999999999999999e-27  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009427  Saro_3660  short-chain dehydrogenase/reductase SDR  29.39 
 
 
291 aa  108  1e-22  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.977972  n/a   
 
 
-
 
NC_008146  Mmcs_0298  short-chain dehydrogenase/reductase SDR  33.45 
 
 
270 aa  106  5e-22  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0308  short-chain dehydrogenase/reductase SDR  33.45 
 
 
270 aa  106  5e-22  Mycobacterium sp. KMS  Bacteria  normal  normal  0.202021 
 
 
-
 
NC_009077  Mjls_0289  short-chain dehydrogenase/reductase SDR  33.45 
 
 
270 aa  106  5e-22  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3919  short-chain dehydrogenase/reductase SDR  32.56 
 
 
268 aa  98.6  1e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.208676  normal 
 
 
-
 
NC_009338  Mflv_2659  short-chain dehydrogenase/reductase SDR  30.43 
 
 
272 aa  89.7  6e-17  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0705302  normal 
 
 
-
 
NC_011004  Rpal_2058  short-chain dehydrogenase/reductase SDR  32.37 
 
 
246 aa  85.1  0.000000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4238  short chain dehydrogenase  27.67 
 
 
264 aa  84.7  0.000000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.210209  normal  0.968836 
 
 
-
 
NC_013730  Slin_0882  short-chain dehydrogenase/reductase SDR  31.1 
 
 
262 aa  83.2  0.000000000000006  Spirosoma linguale DSM 74  Bacteria  normal  0.845671  normal 
 
 
-
 
NC_012560  Avin_31000  Short-chain dehydrogenase/reductase SDR  30.41 
 
 
255 aa  81.3  0.00000000000002  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0265  3-oxoacyl-[acyl-carrier-protein] reductase  27.01 
 
 
248 aa  80.5  0.00000000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.534726  normal 
 
 
-
 
NC_008312  Tery_3438  3-ketoacyl-(acyl-carrier-protein) reductase  27.31 
 
 
252 aa  80.5  0.00000000000004  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_3155  short-chain dehydrogenase/reductase SDR  26 
 
 
249 aa  80.1  0.00000000000005  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_013525  Tter_0012  3-oxoacyl-(acyl-carrier-protein) reductase  28.14 
 
 
248 aa  79.7  0.00000000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009436  Ent638_2039  short-chain dehydrogenase/reductase SDR  31.5 
 
 
249 aa  79.3  0.00000000000008  Enterobacter sp. 638  Bacteria  normal  0.292922  normal  0.566372 
 
 
-
 
NC_011830  Dhaf_3817  3-oxoacyl-(acyl-carrier-protein) reductase  26.72 
 
 
247 aa  79.3  0.00000000000008  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.00000000000000217117  n/a   
 
 
-
 
NC_011884  Cyan7425_1782  3-ketoacyl-(acyl-carrier-protein) reductase  30.1 
 
 
244 aa  79  0.00000000000009  Cyanothece sp. PCC 7425  Bacteria  normal  0.788783  normal 
 
 
-
 
NC_008726  Mvan_2884  short-chain dehydrogenase/reductase SDR  30.65 
 
 
295 aa  79  0.00000000000009  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.114191  normal 
 
 
-
 
NC_009439  Pmen_1509  short-chain dehydrogenase/reductase SDR  31.1 
 
 
250 aa  79  0.0000000000001  Pseudomonas mendocina ymp  Bacteria  normal  0.805502  normal  0.135775 
 
 
-
 
NC_013510  Tcur_3491  short-chain dehydrogenase/reductase SDR  28.73 
 
 
253 aa  77.8  0.0000000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  0.260507  n/a   
 
 
-
 
NC_013205  Aaci_0156  short-chain dehydrogenase/reductase SDR  27.56 
 
 
253 aa  78.2  0.0000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000282185  n/a   
 
 
-
 
NC_007498  Pcar_1438  3-oxoacyl-(acyl-carrier-protein) reductase  27.27 
 
 
245 aa  77.8  0.0000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1877  3-oxoacyl-(acyl-carrier-protein) reductase  27.95 
 
 
246 aa  78.2  0.0000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  0.627616  n/a   
 
 
-
 
NC_008346  Swol_1850  3-oxoacyl-(acyl-carrier protein) reductase  30.26 
 
 
255 aa  77.8  0.0000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00172962  n/a   
 
 
-
 
NC_013131  Caci_2720  short-chain dehydrogenase/reductase SDR  34.07 
 
 
255 aa  77.8  0.0000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3764  3-ketoacyl-(acyl-carrier-protein) reductase  27.52 
 
 
251 aa  77.4  0.0000000000003  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.0000212417  normal  0.0482294 
 
 
-
 
NC_009953  Sare_3217  short-chain dehydrogenase/reductase SDR  31.88 
 
 
247 aa  77.4  0.0000000000003  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2998  short-chain dehydrogenase/reductase SDR  31.88 
 
 
261 aa  77  0.0000000000004  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2393  3-ketoacyl-(acyl-carrier-protein) reductase  27.09 
 
 
247 aa  76.6  0.0000000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.114782  n/a   
 
 
-
 
NC_011370  Rleg2_6281  short-chain dehydrogenase/reductase SDR  26.78 
 
 
264 aa  76.3  0.0000000000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.616501 
 
 
-
 
NC_013501  Rmar_2036  short-chain dehydrogenase/reductase SDR  28.92 
 
 
258 aa  75.9  0.0000000000007  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2848  3-ketoacyl-(acyl-carrier-protein) reductase  28.64 
 
 
246 aa  75.9  0.0000000000008  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013037  Dfer_0878  short chain dehydrogenase  29.69 
 
 
261 aa  75.5  0.000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.787197  normal 
 
 
-
 
NC_013440  Hoch_5651  short-chain dehydrogenase/reductase SDR  30.19 
 
 
254 aa  75.5  0.000000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.507432  normal  0.250737 
 
 
-
 
NC_009091  P9301_04781  3-oxoacyl-[acyl-carrier protein] reductase  25.71 
 
 
249 aa  75.1  0.000000000001  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_3207  3-oxoacyl-(acyl-carrier-protein) reductase  24.81 
 
 
246 aa  75.1  0.000000000002  'Nostoc azollae' 0708  Bacteria  normal  0.819769  n/a   
 
 
-
 
NC_007509  Bcep18194_C7039  Short-chain dehydrogenase/reductase SDR  31.63 
 
 
258 aa  74.7  0.000000000002  Burkholderia sp. 383  Bacteria  normal  normal  0.607221 
 
 
-
 
NC_007511  Bcep18194_B3037  short chain dehydrogenase  30.33 
 
 
254 aa  74.3  0.000000000002  Burkholderia sp. 383  Bacteria  normal  0.0519224  normal 
 
 
-
 
NC_007577  PMT9312_0453  3-oxoacyl-[acyl-carrier-protein] reductase  25.84 
 
 
249 aa  74.7  0.000000000002  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.465318  n/a   
 
 
-
 
NC_013730  Slin_2192  short-chain dehydrogenase/reductase SDR  27.51 
 
 
256 aa  75.1  0.000000000002  Spirosoma linguale DSM 74  Bacteria  normal  hitchhiker  0.0046226 
 
 
-
 
NC_008816  A9601_05091  3-oxoacyl-[acyl-carrier protein] reductase  25.71 
 
 
249 aa  74.7  0.000000000002  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_5273  short chain dehydrogenase  30.33 
 
 
254 aa  73.9  0.000000000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1426  short-chain dehydrogenase/reductase SDR  32.06 
 
 
254 aa  73.6  0.000000000004  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0198421 
 
 
-
 
NC_008391  Bamb_5079  short chain dehydrogenase  29.86 
 
 
260 aa  73.6  0.000000000004  Burkholderia ambifaria AMMD  Bacteria  normal  0.703587  normal 
 
 
-
 
NC_013158  Huta_1017  short-chain dehydrogenase/reductase SDR  29.91 
 
 
245 aa  73.6  0.000000000004  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_007348  Reut_B5719  short chain dehydrogenase  29.86 
 
 
254 aa  73.2  0.000000000005  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0712  3-oxoacyl-(acyl-carrier-protein) reductase  25.72 
 
 
246 aa  73.2  0.000000000005  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  0.00000000000000308432  n/a   
 
 
-
 
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