| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5079 |
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| Symbol | |
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| ID | 4313970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2102268 |
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| End bp | 2103050 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638152922 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_776962 |
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| Protein GI | 115359824 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.703587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGAGC ACAGCAACAT GGCAACGAAT CTGTTCGACC TGACGGGCAA GATCGCGCTG
GTTACGGGCG CGAGCCGCGG CATCGGCGAG GAAATCGCGA AGCTGCTCGC GGAGCAGGGC
GCGCACGTGA TCGTGTCGAG CCGCAAGCTC GACGACTGCC AGGCGGTCGC GGACGCGATC
GTCGCGGCGG GCGGCCGCGC CGAAGCGCTG GCCTGTCACG TCGGGCGGCT GGAGGATATC
ACCGCGACGT TCGAGACGAT CCGCGGCAAG CACGGCCGGC TCGACATCCT CGTAAACAAC
GCGGCCGCGA ACCCGTATTT CGGGCACATC CTCGATACCG ATCTCGCCGC GTACGAAAAG
ACCGTCGACG TGAACATCCG CGGCTACTTC TTCATGTCGG TCGAGGCCGG CAAGCTGATG
AAGGCGCAGG GCGGCGGCGC GATCGTCAAC ACCGCGTCGG TGAACGCGCT GCAGCCGGGC
GACCGGCAGG GCATCTACTC GATCACGAAG GCGGCCGTCG TCAACATGAC GAAGGCGTTC
GCGAAGGAGT GCGGGCCGTT CGGCATCCGC GTGAACGCGC TGCTGCCGGG CCTCACGAAG
ACGAAGTTCG CGGGCGCGCT GTTCGCCGAC AAGGACATTT ACGAAAGCTG GATGGCGAAG
ATCCCGCTGC GCCGCCATGC GGAACCGCGT GAAATGGCCG GCACAGTGCT GTATCTCGTG
TCGGACGCGG CGAGCTACAC GAACGGCGAA TGCATCGTCG TCGACGGCGG CCTGACGATC
TGA
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| Protein sequence | MEEHSNMATN LFDLTGKIAL VTGASRGIGE EIAKLLAEQG AHVIVSSRKL DDCQAVADAI
VAAGGRAEAL ACHVGRLEDI TATFETIRGK HGRLDILVNN AAANPYFGHI LDTDLAAYEK
TVDVNIRGYF FMSVEAGKLM KAQGGGAIVN TASVNALQPG DRQGIYSITK AAVVNMTKAF
AKECGPFGIR VNALLPGLTK TKFAGALFAD KDIYESWMAK IPLRRHAEPR EMAGTVLYLV
SDAASYTNGE CIVVDGGLTI
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