More than 300 homologs were found in PanDaTox collection
for query gene Mkms_0308 on replicon NC_008705
Organism: Mycobacterium sp. KMS



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008146  Mmcs_0298  short-chain dehydrogenase/reductase SDR  100 
 
 
270 aa  537  9.999999999999999e-153  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0308  short-chain dehydrogenase/reductase SDR  100 
 
 
270 aa  537  9.999999999999999e-153  Mycobacterium sp. KMS  Bacteria  normal  normal  0.202021 
 
 
-
 
NC_009077  Mjls_0289  short-chain dehydrogenase/reductase SDR  100 
 
 
270 aa  537  9.999999999999999e-153  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3919  short-chain dehydrogenase/reductase SDR  73 
 
 
268 aa  377  1e-103  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.208676  normal 
 
 
-
 
NC_009338  Mflv_2659  short-chain dehydrogenase/reductase SDR  75.29 
 
 
272 aa  367  1e-100  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0705302  normal 
 
 
-
 
NC_009511  Swit_3334  short-chain dehydrogenase/reductase SDR  58.93 
 
 
287 aa  296  3e-79  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0183767 
 
 
-
 
NC_007511  Bcep18194_B1508  Short-chain dehydrogenase/reductase SDR  55.91 
 
 
288 aa  286  2e-76  Burkholderia sp. 383  Bacteria  normal  0.316144  normal  0.580849 
 
 
-
 
NC_007347  Reut_A1549  Short-chain dehydrogenase/reductase SDR  56.63 
 
 
288 aa  280  1e-74  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1260  short-chain dehydrogenase/reductase SDR  54.44 
 
 
286 aa  271  6e-72  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.838169  normal  0.0136631 
 
 
-
 
NC_008146  Mmcs_4935  short-chain dehydrogenase/reductase SDR  54.04 
 
 
287 aa  268  8e-71  Mycobacterium sp. MCS  Bacteria  normal  0.838835  n/a   
 
 
-
 
NC_008705  Mkms_5023  short-chain dehydrogenase/reductase SDR  54.04 
 
 
287 aa  268  8e-71  Mycobacterium sp. KMS  Bacteria  normal  0.422551  normal 
 
 
-
 
NC_009077  Mjls_5316  short-chain dehydrogenase/reductase SDR  54.04 
 
 
287 aa  268  8e-71  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3660  short-chain dehydrogenase/reductase SDR  48.78 
 
 
291 aa  253  2.0000000000000002e-66  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.977972  n/a   
 
 
-
 
NC_009921  Franean1_3687  short-chain dehydrogenase/reductase SDR  43.88 
 
 
286 aa  196  4.0000000000000005e-49  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0770  short-chain dehydrogenase/reductase SDR  47.24 
 
 
277 aa  194  2e-48  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_3074  short-chain dehydrogenase/reductase SDR  40.7 
 
 
324 aa  173  1.9999999999999998e-42  Cyanothece sp. PCC 8802  Bacteria  normal  0.0229278  normal  0.993733 
 
 
-
 
NC_011726  PCC8801_3048  short-chain dehydrogenase/reductase SDR  40 
 
 
324 aa  172  5.999999999999999e-42  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_4906  Short-chain dehydrogenase/reductase SDR  39.86 
 
 
327 aa  166  4e-40  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.499645 
 
 
-
 
NC_008312  Tery_2630  short-chain dehydrogenase/reductase SDR  37.06 
 
 
322 aa  158  9e-38  Trichodesmium erythraeum IMS101  Bacteria  normal  0.067703  normal 
 
 
-
 
NC_003910  CPS_3727  short chain dehydrogenase/reductase family oxidoreductase  34.78 
 
 
279 aa  136  4e-31  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011676  PHATRDRAFT_12303  predicted protein  34.68 
 
 
334 aa  132  6.999999999999999e-30  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_012791  Vapar_2570  short-chain dehydrogenase/reductase SDR  35.82 
 
 
298 aa  123  4e-27  Variovorax paradoxus S110  Bacteria  normal  0.596846  n/a   
 
 
-
 
NC_012850  Rleg_1029  short chain dehydrogenase  32.89 
 
 
304 aa  122  9e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0897  short chain dehydrogenase  33.55 
 
 
304 aa  119  4.9999999999999996e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3646  short-chain dehydrogenase/reductase SDR  34.15 
 
 
308 aa  114  2.0000000000000002e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  0.570438  n/a   
 
 
-
 
NC_013946  Mrub_0336  short-chain dehydrogenase/reductase SDR  31.25 
 
 
304 aa  113  4.0000000000000004e-24  Meiothermus ruber DSM 1279  Bacteria  normal  0.607685  normal 
 
 
-
 
NC_009953  Sare_0102  short-chain dehydrogenase/reductase SDR  34.43 
 
 
304 aa  108  7.000000000000001e-23  Salinispora arenicola CNS-205  Bacteria  normal  0.440904  hitchhiker  0.000946553 
 
 
-
 
NC_009972  Haur_3090  short-chain dehydrogenase/reductase SDR  30.88 
 
 
293 aa  107  2e-22  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.57979  n/a   
 
 
-
 
NC_014212  Mesil_2684  short-chain dehydrogenase/reductase SDR  31.6 
 
 
307 aa  102  7e-21  Meiothermus silvanus DSM 9946  Bacteria  normal  0.122306  normal 
 
 
-
 
NC_008541  Arth_0371  short chain dehydrogenase  30.34 
 
 
305 aa  102  8e-21  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4136  short chain dehydrogenase  31.74 
 
 
304 aa  101  1e-20  Salinispora tropica CNB-440  Bacteria  normal  0.210965  normal 
 
 
-
 
NC_013739  Cwoe_0043  short-chain dehydrogenase/reductase SDR  31.9 
 
 
309 aa  100  2e-20  Conexibacter woesei DSM 14684  Bacteria  normal  0.591318  normal  0.770282 
 
 
-
 
NC_009675  Anae109_0592  short chain dehydrogenase  31.49 
 
 
303 aa  100  2e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_0585  short chain dehydrogenase  32.35 
 
 
314 aa  99.8  5e-20  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1242  short chain dehydrogenase  32.42 
 
 
308 aa  99.4  6e-20  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0581  short chain dehydrogenase  32.46 
 
 
303 aa  99.4  6e-20  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.952569  n/a   
 
 
-
 
NC_014158  Tpau_1937  short-chain dehydrogenase/reductase SDR  31.42 
 
 
308 aa  96.3  5e-19  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3979  short chain dehydrogenase  31.01 
 
 
304 aa  95.1  1e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0555299  normal 
 
 
-
 
NC_009077  Mjls_2781  short chain dehydrogenase  30.1 
 
 
307 aa  93.2  4e-18  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0246  short chain dehydrogenase  31.08 
 
 
351 aa  92.8  5e-18  Frankia sp. EAN1pec  Bacteria  normal  0.153805  normal  0.728482 
 
 
-
 
NC_007760  Adeh_0551  short chain dehydrogenase  31.48 
 
 
303 aa  92.4  6e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.387697  n/a   
 
 
-
 
NC_013947  Snas_3030  short-chain dehydrogenase/reductase SDR  29.71 
 
 
305 aa  90.1  3e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.303989  normal 
 
 
-
 
NC_013159  Svir_36450  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  29.45 
 
 
304 aa  90.1  3e-17  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.907148 
 
 
-
 
NC_008146  Mmcs_2751  short chain dehydrogenase  29.74 
 
 
307 aa  89.7  4e-17  Mycobacterium sp. MCS  Bacteria  normal  0.424079  n/a   
 
 
-
 
NC_010511  M446_2372  short-chain dehydrogenase/reductase SDR  31.41 
 
 
290 aa  89.7  4e-17  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_2795  short chain dehydrogenase  29.74 
 
 
307 aa  89.7  4e-17  Mycobacterium sp. KMS  Bacteria  normal  0.145594  normal 
 
 
-
 
NC_008025  Dgeo_0378  short-chain dehydrogenase/reductase SDR  34.67 
 
 
291 aa  87.4  2e-16  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3903  short-chain dehydrogenase/reductase SDR  29.82 
 
 
283 aa  86.3  4e-16  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3611  short-chain dehydrogenase/reductase SDR  29.12 
 
 
287 aa  84.7  0.000000000000001  Methylobacterium extorquens PA1  Bacteria  normal  0.447162  normal 
 
 
-
 
NC_013595  Sros_3383  short chain dehydrogenase  33.1 
 
 
298 aa  84  0.000000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.479442 
 
 
-
 
NC_013093  Amir_7010  short-chain dehydrogenase/reductase SDR  30.15 
 
 
302 aa  82.4  0.000000000000007  Actinosynnema mirum DSM 43827  Bacteria  normal  0.126054  n/a   
 
 
-
 
NC_013159  Svir_23700  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  29.47 
 
 
315 aa  80.1  0.00000000000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.256635 
 
 
-
 
NC_009953  Sare_2123  short-chain dehydrogenase/reductase SDR  30.11 
 
 
304 aa  79.3  0.00000000000006  Salinispora arenicola CNS-205  Bacteria  normal  0.0115254  normal  0.127014 
 
 
-
 
NC_008726  Mvan_4623  short-chain dehydrogenase/reductase SDR  34.24 
 
 
265 aa  79.3  0.00000000000006  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4290  short-chain dehydrogenase/reductase SDR  28.42 
 
 
283 aa  78.6  0.0000000000001  Methylobacterium populi BJ001  Bacteria  normal  0.850912  normal  0.934424 
 
 
-
 
NC_009512  Pput_2972  short-chain dehydrogenase/reductase SDR  29.44 
 
 
245 aa  75.5  0.0000000000009  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I2241  3-ketoacyl-(acyl-carrier-protein) reductase  34.04 
 
 
245 aa  73.9  0.000000000002  Aliivibrio salmonicida LFI1238  Bacteria  unclonable  0.0000319418  n/a   
 
 
-
 
NC_002947  PP_2783  3-oxoacyl-(acyl-carrier-protein) reductase  29.44 
 
 
245 aa  74.7  0.000000000002  Pseudomonas putida KT2440  Bacteria  normal  0.335841  normal 
 
 
-
 
NC_011894  Mnod_2839  short-chain dehydrogenase/reductase SDR  30.32 
 
 
284 aa  74.3  0.000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.810748  n/a   
 
 
-
 
NC_008048  Sala_1896  3-oxoacyl-(acyl-carrier-protein) reductase  36.52 
 
 
247 aa  74.3  0.000000000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.176277 
 
 
-
 
NC_012034  Athe_1156  3-oxoacyl-(acyl-carrier-protein) reductase  27.18 
 
 
248 aa  74.3  0.000000000002  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000536759  n/a   
 
 
-
 
NC_009953  Sare_1066  short-chain dehydrogenase/reductase SDR  37.21 
 
 
234 aa  73.9  0.000000000002  Salinispora arenicola CNS-205  Bacteria  normal  0.221746  normal  0.0212463 
 
 
-
 
NC_009953  Sare_2412  short-chain dehydrogenase/reductase SDR  30.63 
 
 
303 aa  73.6  0.000000000003  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.330008 
 
 
-
 
NC_007948  Bpro_3587  short-chain dehydrogenase/reductase SDR  31.38 
 
 
254 aa  73.2  0.000000000005  Polaromonas sp. JS666  Bacteria  normal  normal  0.302231 
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  28.5 
 
 
236 aa  72.8  0.000000000006  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_007517  Gmet_1601  3-oxoacyl-[acyl-carrier-protein] reductase  30.39 
 
 
246 aa  72.4  0.000000000007  Geobacter metallireducens GS-15  Bacteria  normal  0.0250629  normal  0.870822 
 
 
-
 
NC_007951  Bxe_A2677  putative short-chain dehydrogenase/oxidoreductase  28.44 
 
 
245 aa  72  0.000000000008  Burkholderia xenovorans LB400  Bacteria  normal  0.334903  normal 
 
 
-
 
NC_012669  Bcav_2322  short-chain dehydrogenase/reductase SDR  33.69 
 
 
253 aa  71.6  0.00000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.470918  normal  0.546691 
 
 
-
 
NC_007963  Csal_0785  3-ketoacyl-(acyl-carrier-protein) reductase  33.47 
 
 
246 aa  71.6  0.00000000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2742  short chain dehydrogenase  34.62 
 
 
252 aa  71.6  0.00000000001  Nocardioides sp. JS614  Bacteria  normal  0.0442377  n/a   
 
 
-
 
NC_011368  Rleg2_4589  short-chain dehydrogenase/reductase SDR  32.52 
 
 
254 aa  71.2  0.00000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.496264  normal 
 
 
-
 
NC_008345  Sfri_1499  3-oxoacyl-(acyl-carrier-protein) reductase  33.13 
 
 
248 aa  71.2  0.00000000002  Shewanella frigidimarina NCIMB 400  Bacteria  unclonable  0.00000000126797  n/a   
 
 
-
 
NC_009720  Xaut_2698  short-chain dehydrogenase/reductase SDR  36.61 
 
 
267 aa  70.9  0.00000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.257261 
 
 
-
 
NC_007514  Cag_1662  3-oxoacyl-(acyl-carrier-protein) reductase  26.67 
 
 
245 aa  70.5  0.00000000003  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2262  short-chain dehydrogenase/reductase SDR  33.71 
 
 
244 aa  70.5  0.00000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  hitchhiker  0.0000989308  normal 
 
 
-
 
NC_007347  Reut_A1762  Short-chain dehydrogenase/reductase SDR  32.85 
 
 
252 aa  70.1  0.00000000004  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5665  short-chain dehydrogenase/reductase SDR  30.48 
 
 
257 aa  69.7  0.00000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.135845  normal 
 
 
-
 
NC_013205  Aaci_0669  short-chain dehydrogenase/reductase SDR  32.3 
 
 
255 aa  70.1  0.00000000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2046  glucose/ribitol dehydrogenase  26.44 
 
 
550 aa  69.7  0.00000000004  Salinispora tropica CNB-440  Bacteria  normal  0.164018  normal 
 
 
-
 
NC_013131  Caci_5927  short-chain dehydrogenase/reductase SDR  31.82 
 
 
248 aa  69.7  0.00000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.142802 
 
 
-
 
NC_013757  Gobs_1719  short-chain dehydrogenase/reductase SDR  36.27 
 
 
251 aa  69.7  0.00000000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2293  3-oxoacyl-(acyl-carrier-protein) reductase  34.94 
 
 
248 aa  69.7  0.00000000005  Shewanella denitrificans OS217  Bacteria  unclonable  0.00000000000712528  n/a   
 
 
-
 
NC_008699  Noca_2571  3-oxoacyl-[acyl-carrier-protein] reductase  35.84 
 
 
239 aa  69.7  0.00000000005  Nocardioides sp. JS614  Bacteria  normal  0.0716578  n/a   
 
 
-
 
NC_012854  Rleg_6325  short-chain dehydrogenase/reductase SDR  31.07 
 
 
254 aa  69.3  0.00000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.251484  normal 
 
 
-
 
NC_013172  Bfae_09810  short-chain alcohol dehydrogenase  31.13 
 
 
261 aa  69.3  0.00000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0913042  n/a   
 
 
-
 
NC_013595  Sros_2066  short chain dehydrogenase  33.33 
 
 
251 aa  69.3  0.00000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.552994  normal  0.919137 
 
 
-
 
NC_013441  Gbro_3980  short-chain dehydrogenase/reductase SDR  33.69 
 
 
267 aa  69.3  0.00000000007  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7515  short-chain dehydrogenase/reductase SDR  33.82 
 
 
246 aa  69.3  0.00000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3827  short-chain dehydrogenase/reductase SDR  27.56 
 
 
280 aa  68.9  0.00000000008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_2006  short-chain dehydrogenase/reductase SDR  27.94 
 
 
274 aa  68.9  0.00000000009  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.157395 
 
 
-
 
NC_010655  Amuc_0994  3-oxoacyl-(acyl-carrier-protein) reductase  30.32 
 
 
248 aa  68.6  0.0000000001  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal  0.931337 
 
 
-
 
NC_009511  Swit_3886  short-chain dehydrogenase/reductase SDR  30.49 
 
 
263 aa  68.2  0.0000000001  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1438  3-oxoacyl-(acyl-carrier-protein) reductase  29.9 
 
 
245 aa  68.2  0.0000000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2042  3-oxoacyl-(acyl-carrier-protein) reductase  30.65 
 
 
248 aa  68.6  0.0000000001  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.0000000691929  decreased coverage  0.00609535 
 
 
-
 
NC_009921  Franean1_3710  short-chain dehydrogenase/reductase SDR  31.25 
 
 
262 aa  68.6  0.0000000001  Frankia sp. EAN1pec  Bacteria  normal  0.583089  normal 
 
 
-
 
NC_010003  Pmob_0517  3-oxoacyl-(acyl-carrier-protein) reductase  26.37 
 
 
247 aa  68.2  0.0000000001  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0470  enoyl-(acyl carrier protein) reductase  27.78 
 
 
249 aa  68.2  0.0000000001  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000863447  n/a   
 
 
-
 
NC_010501  PputW619_0542  short-chain dehydrogenase/reductase SDR  29.51 
 
 
253 aa  68.6  0.0000000001  Pseudomonas putida W619  Bacteria  normal  normal  0.0795693 
 
 
-
 
NC_008816  A9601_05091  3-oxoacyl-[acyl-carrier protein] reductase  27.72 
 
 
249 aa  68.2  0.0000000001  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_04781  3-oxoacyl-[acyl-carrier protein] reductase  27.72 
 
 
249 aa  68.6  0.0000000001  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
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