| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_2839 |
|---|
| Symbol | |
|---|
| ID | 7303930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 2917009 |
|---|
| End bp | 2917863 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643600547 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002498093 |
|---|
| Protein GI | 220922791 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.810748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCCGG CGGGCGTGCC GGACCTCTCC GACAAGGTCT GCCTCGTTGC GGGAGCCTCG
CGGGGCGTCG GGCGCGGCAT CGCGCGGGCG CTCGGCGAGG CGGGCGCCAC CGTGATCGTC
ACCGGCCGCT CCAGCGAGAG CGGCCCGCGC ACCGATGGGC GCCCGGAGGT GCTGGAGGAC
GCCGCCCGCG AGGTCGATCT CATGGGAGGG CGCGGCGTCC ACTATCTCTG CGACCACATC
CGCGAGCAGG AAGTCGACGG GCTCGTGCAC TGGGCGCTGC GCCGCTTCGG CCGCATCGAC
GTGGCGGTGT CGAGCGTCTG GGGCGGCAAC GAGGGCTATG ACGGGGACCG CTTCCCCGAC
GGGGCCGCCT GGGGCGATCC GTTCTGGCGC CGCGCCGCGA CGCCGCTCGG CCATGCTTTG
CAATCCGGTC CCTTCGCGGC GCTGCTCCTC GCCCGGGCCG TGGCGCCCGC CATGGTCTCG
GCCAAGCGCG GCCTTCTCGT CTTCGTCTCC TTCGGCACGC AGGAGGGCTA TCTGGGCGAC
GTCTTCTACG ACCTCGCCAT GGCGACGACG AACCGCCTCG CACTGGCAAC GGCGGCGGAG
CTCGCGCCCT GCGGCGTGAC GGCGCTCGCC CTGTCACCCG GGCGGGTGCG GACCGAGCGC
GCCATCGATG CCGGGCTGGG GCAGGAGGCC GGCGAGACGC CGCTCTATGC GGGCCGCGCC
GTCGCGGCCC TCGCGGGCGA TCCCGGTGTG GCGGCGCGCG CCGGCCGCAC GCTCCACGTC
GCCGACCTCG CCCGCACCTA CGGCTTCACG GACGAGGACG GCAGCCGGCC GGACCGGTTC
CGCATCGGCG CCTAA
|
|---|
| Protein sequence | MRPAGVPDLS DKVCLVAGAS RGVGRGIARA LGEAGATVIV TGRSSESGPR TDGRPEVLED
AAREVDLMGG RGVHYLCDHI REQEVDGLVH WALRRFGRID VAVSSVWGGN EGYDGDRFPD
GAAWGDPFWR RAATPLGHAL QSGPFAALLL ARAVAPAMVS AKRGLLVFVS FGTQEGYLGD
VFYDLAMATT NRLALATAAE LAPCGVTALA LSPGRVRTER AIDAGLGQEA GETPLYAGRA
VAALAGDPGV AARAGRTLHV ADLARTYGFT DEDGSRPDRF RIGA
|
|---|
| |