Gene Sfri_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1499 
Symbol 
ID4278065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1789209 
End bp1789955 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content41% 
IMG OID638134279 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_750188 
Protein GI114562675 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000126797 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTTA GCATTAATTT AGACGGTAAA GTTGCCCTAG TAACAGGTGC TAGTCGTGGT 
ATTGGGCGTG CGATTGCTGA ATCATTAGTA CAAGCTGGTG CGATGGTTAT CGGTACTGCA
ACCAGTGAAA AAGGTGCTGC GGCGATTCAA GCATACTTAG GTGACAAAGG CTTTGGGATG
GTGTTAAATG TCACTGATTC TCAATCTGTT GCTGATTTAT ATAGCCAGAT CAAAGAAAAA
GCAGGTGAAG TTGATATTCT TATCAACAAT GCGGGTATTA CCCGTGACAA TTTATTAATG
CGGATGAAAG ATGATGAGTG GCAAGATATT ATTGACACGA ATTTGACATC CCTATTTAAA
TTGTCTAAAC CAGTAATGCG ATCTATGATG AAAAAACGTT TCGGACGTAT TATCAGTATC
GGTTCTGTAG TAGGTACAAT GGGTAATGCT GGCCAAGTAA ATTACTCGGC AGCTAAAGCT
GGTTTGATCG GATTTACAAA ATCTCTTGCA AGAGAGGTTG CATCTCGTCA AATAACAGTG
AATGCTATTG CACCTGGATT TATCCAGACA GACATGACAG ATGAGCTGAC AGTTGAGCAG
CAACAAGCTA TTATGTCGCA AGTTCCGATG GAACGATTAG GGCAAGCACA AGAAATTGCC
AATGCAGTAT TGTTTTTGGC CTCGGATTCA GCCGCTTATA TCACAGGCGA AACATTGCAT
GTGAATGGCG GTATGTACAT GGTTTAA
 
Protein sequence
MSFSINLDGK VALVTGASRG IGRAIAESLV QAGAMVIGTA TSEKGAAAIQ AYLGDKGFGM 
VLNVTDSQSV ADLYSQIKEK AGEVDILINN AGITRDNLLM RMKDDEWQDI IDTNLTSLFK
LSKPVMRSMM KKRFGRIISI GSVVGTMGNA GQVNYSAAKA GLIGFTKSLA REVASRQITV
NAIAPGFIQT DMTDELTVEQ QQAIMSQVPM ERLGQAQEIA NAVLFLASDS AAYITGETLH
VNGGMYMV