Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1499 |
Symbol | |
ID | 4278065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1789209 |
End bp | 1789955 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638134279 |
Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
Protein accession | YP_750188 |
Protein GI | 114562675 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000126797 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTTA GCATTAATTT AGACGGTAAA GTTGCCCTAG TAACAGGTGC TAGTCGTGGT ATTGGGCGTG CGATTGCTGA ATCATTAGTA CAAGCTGGTG CGATGGTTAT CGGTACTGCA ACCAGTGAAA AAGGTGCTGC GGCGATTCAA GCATACTTAG GTGACAAAGG CTTTGGGATG GTGTTAAATG TCACTGATTC TCAATCTGTT GCTGATTTAT ATAGCCAGAT CAAAGAAAAA GCAGGTGAAG TTGATATTCT TATCAACAAT GCGGGTATTA CCCGTGACAA TTTATTAATG CGGATGAAAG ATGATGAGTG GCAAGATATT ATTGACACGA ATTTGACATC CCTATTTAAA TTGTCTAAAC CAGTAATGCG ATCTATGATG AAAAAACGTT TCGGACGTAT TATCAGTATC GGTTCTGTAG TAGGTACAAT GGGTAATGCT GGCCAAGTAA ATTACTCGGC AGCTAAAGCT GGTTTGATCG GATTTACAAA ATCTCTTGCA AGAGAGGTTG CATCTCGTCA AATAACAGTG AATGCTATTG CACCTGGATT TATCCAGACA GACATGACAG ATGAGCTGAC AGTTGAGCAG CAACAAGCTA TTATGTCGCA AGTTCCGATG GAACGATTAG GGCAAGCACA AGAAATTGCC AATGCAGTAT TGTTTTTGGC CTCGGATTCA GCCGCTTATA TCACAGGCGA AACATTGCAT GTGAATGGCG GTATGTACAT GGTTTAA
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Protein sequence | MSFSINLDGK VALVTGASRG IGRAIAESLV QAGAMVIGTA TSEKGAAAIQ AYLGDKGFGM VLNVTDSQSV ADLYSQIKEK AGEVDILINN AGITRDNLLM RMKDDEWQDI IDTNLTSLFK LSKPVMRSMM KKRFGRIISI GSVVGTMGNA GQVNYSAAKA GLIGFTKSLA REVASRQITV NAIAPGFIQT DMTDELTVEQ QQAIMSQVPM ERLGQAQEIA NAVLFLASDS AAYITGETLH VNGGMYMV
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