| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4290 |
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| Symbol | |
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| ID | 6311729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 4575837 |
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| End bp | 4576688 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 642652975 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001926931 |
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| Protein GI | 188583486 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.850912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.934424 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGT CGTTGCGGGG AAAGGTCTGC CTCGTGGCCG GGGCCTCGCG CGGGGTCGGG
CGCGGGCTCG CCCGGGGGCT GGGGGAGGCC GGCGCCACGG TGATCGTCAC CGCCCGCTCC
TCCGAGACCG GGCGGCGCAC CGAGACGCGG CCCGAGACGA TCGAGGACAC CGCCCGCGCC
GTCGATGCGG CGGGCGGCGA GGGACACCAT TACCTGTGCG ACCACACCAG CGAGCGGGCG
GTGGACGAAC TCGTGCACTG GTGCCTGCGC CGGTTCGGGC GGATCGACGT CGCGGCCTCC
TCGGTCTGGG GCGGCAACGA GGGCTATGAC GGCGCCCGCT ACCCCGACGG CGCCGCCTGG
GGCACGCCGT TCTGGCGCCG CTCGGCCGAG CCGTTCGCGC AGTTCCTCGG CACCGGGCCG
TATCCGGCCC TGCTGCTGGC GCGGGCCGTG GCGCCGGCCA TGGTGGCGGC CCGGCAGGGG
CTGATCGCCT TCGTCTCCTT CGGCACCGAG GACGGGTTCC TGGGGGACTT CTATTACGAC
CTCGCCAAGG CGGCGACGAA CCGCCTCGCC TTCGCCTGCG CCGCCGAACT GGCGCCGCAC
GGGGTCTGCG CGCTGGGGCT CTCGCCGGGC TTCGTCGCCA CCGAGCGGGT GCGCGACCTG
GATCAGGAGG CGCTCGCCAC CGAGAGCCCG CTCTATGCCG GCCGCGCGCT CGCGGCATTG
GCCGCCGACC CGTCCGTGCT GGACCGGGCC GGGGCGACGC TGCATGTCGG GGACCTCGCC
CGCGCCTACG GGTTCACCGA CGCCGACGGA CGCCAGCCGG AGCGCTTCCG GATCGGAGAG
GAGATGCCAT GA
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| Protein sequence | MTPSLRGKVC LVAGASRGVG RGLARGLGEA GATVIVTARS SETGRRTETR PETIEDTARA
VDAAGGEGHH YLCDHTSERA VDELVHWCLR RFGRIDVAAS SVWGGNEGYD GARYPDGAAW
GTPFWRRSAE PFAQFLGTGP YPALLLARAV APAMVAARQG LIAFVSFGTE DGFLGDFYYD
LAKAATNRLA FACAAELAPH GVCALGLSPG FVATERVRDL DQEALATESP LYAGRALAAL
AADPSVLDRA GATLHVGDLA RAYGFTDADG RQPERFRIGE EMP
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