| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1066 |
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| Symbol | |
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| ID | 5705679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 1192866 |
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| End bp | 1193570 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641270582 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001535966 |
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| Protein GI | 159036713 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.221746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0212463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGGT CTGTCCTGGT AACCGGCGGG AGCCGTGGAA TCGGTCTTGC CGTGGCTCGA
CGACTCAGCG CCGACGGTAA CCGGGTCGCG GTGACCTACC GATCAGGGGA ACCCCCGGAC
GGTCTGCTGG CCGTGCCGTG TGACGTCCTC GACGCGGCCG CCGTGGACGA GGCATTCACC
ACAGTCGAGG CGGAGCTGGG GCCGGTGGAG GTGCTGGTGG CGAACGCCGG CATCACCAAG
GACACGTTGC TGATCCGGAT GTCGGAAGGA GACTTCACCT CGGTGATCGA CACGAACCTC
ACCGGTACCT ACCGGGTGGT CAAACGCGCA GCGAGGAACC TGATGCGGGC ACGATCCGGA
CGAGTGGTGA TCATTTCCTC GACGGCCGCG CTGAGCGGCG TCGTGGGCCA GGTGAACTAC
GGCTCCTCGA AGGCGGGCCT GATCGGCATG GCCCGATCGC TGGCCCGTGA GTTCGCGCCG
CGCGGGGTGC TGGTGAACGT GGTGGCGCCC GGGCTCACCG ACACCGCGAT GAGCACCGCC
CTCTCCGACA CGACCCGTGA CTCTATCGTC GGCCGGATTC CGTTGGGCCG GATGGCGACC
CCGGAGGAGG TGGCCGCCAC GGTTCGCTTC CTCGCTTCCG AGGACGCCTC CTACATCACC
GGGGCCGTCA TCCCCGTCGA CGGTGGCATG GGAATGGGGC ACTGA
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| Protein sequence | MSRSVLVTGG SRGIGLAVAR RLSADGNRVA VTYRSGEPPD GLLAVPCDVL DAAAVDEAFT
TVEAELGPVE VLVANAGITK DTLLIRMSEG DFTSVIDTNL TGTYRVVKRA ARNLMRARSG
RVVIISSTAA LSGVVGQVNY GSSKAGLIGM ARSLAREFAP RGVLVNVVAP GLTDTAMSTA
LSDTTRDSIV GRIPLGRMAT PEEVAATVRF LASEDASYIT GAVIPVDGGM GMGH
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