| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3727 |
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| Symbol | |
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| ID | 3519187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3887551 |
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| End bp | 3888390 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637286174 |
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| Product | short chain dehydrogenase/reductase family oxidoreductase |
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| Protein accession | YP_270394 |
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| Protein GI | 71278190 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCTC TATTCGGTAA GGTTGCACTT GTTACTGGAG CAAGCCGTGG TATTGGAAAA
GGTATTGCGC TTAGCTTGGG CGAAGCAGGC GCGAAAGTCT ATATTACGGG AAGAACTGTC
GAGGAAGGGA AATCTGCTTC ATGCCTGTCC GGAACAATCC ACCAGACAGT TGAAGAGGTC
ATTAAATTAG GGGGAGAATG TGTGGCTATT CAATGTGACC ATAGCATTGA TTCTGAAGTG
GAAGCCGCGT TTAATCGTAT TAATGCAGAG AATAAGCGAC TGAATATTCT GGTTAATAAT
GTTTGGGGTG GTTACGAACA TTATACTGAT GGTACCGAGT TCTGGCATGA AAATGGATTT
TGGACTGTAC CAATTTCACG TTGGGACGCT ATGTTTCACT CTGGAGTTCG AGCCAATTAT
ATATCCAGCG TACTTGCTGT ACCGCTATTA ATGCAGCAAG AAGATTCCCT TATAATTACT
CTTTCATTTT TCGCCGCTCA ACGTAATGAC AAAGGAGTAG CATACGGTAC TGCTAAAGCC
GCCTCCGATC ATATGGTAGC GTGTATGGCA GAAGAGTTAC GAGAACATAA TATTGCTGCT
GTTTCTCTGT ATCCTGGCCT TGTACGTACT GAGTCGGTAA TGAAAGCCGC AAAGCATTTA
GATTTATCCA ATTCTGAATC ACCACAATTT ATTGGACGGG CAGTTGTAGC ACTTGCTAGC
GATACTGATA TCATGAAAAA ATCGGGACGG GTATTGGTTG CCGCAAAGCT TGCCCAAGAA
TATGGTTTCA CTGACATCAA TGGAGAGCAA CCACGCCCTT TAACGGCACA AGATGTTTAG
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| Protein sequence | MKPLFGKVAL VTGASRGIGK GIALSLGEAG AKVYITGRTV EEGKSASCLS GTIHQTVEEV
IKLGGECVAI QCDHSIDSEV EAAFNRINAE NKRLNILVNN VWGGYEHYTD GTEFWHENGF
WTVPISRWDA MFHSGVRANY ISSVLAVPLL MQQEDSLIIT LSFFAAQRND KGVAYGTAKA
ASDHMVACMA EELREHNIAA VSLYPGLVRT ESVMKAAKHL DLSNSESPQF IGRAVVALAS
DTDIMKKSGR VLVAAKLAQE YGFTDINGEQ PRPLTAQDV
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