| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3090 |
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| Symbol | |
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| ID | 5734962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 3899483 |
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| End bp | 3900364 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641280234 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001545856 |
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| Protein GI | 159899609 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.57979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACCA AACCTTTAGT CGGAAAAGTC GCCTTGGTGG CTGGGGCAAC CCGTGGTTGT
GGCCGTGGCA TCGCGGTAAG TTTGGGCGAG GCTGGCGCAA CCGTCTATTG TACAGGCCGC
ACGACCCGCA ATCAACGTTC GCCAATCAAT CGAACTGAAA CAATCGACGA TACTGCTGAA
ATGGTGACGG CGGCTGGTGG TCAGGGCATT GCCATCCAAG TTGATCATAA CGATCCTGCC
CAAGTTGAAG CCTTGATTCA ACGGATTAAC ACTGAGCAAT CTGGTCAACT CGATATTGTG
GTGAATGATA TTTGGGGTGG CCAACATGCA CTGGTTTGGG AGCAGAAGTT TTGGCAAGGC
GATATTCACA CCAATCTAAA CCTCGTACAT AACTCAATCG ATACCCACTT AATTACCTCG
TTTTATGCAG CGCCGCTGAT GGTTGCCCGT GGTCAGGGCT TGATTATCGA AGTTACCGAT
GGCGATACGC TGAATTATCG CGGCCATAGC ATCTACGACT TGATCAAAAC CAGTGTTATG
CGGATTGCTG TTGGTATGCA CGAAGATTTG AAAGACCATG GTGTGACAGC CTTAGCCGTG
ACTCCAGGCT TTTTGCGCTC TGAAGAAATG CTTGATTATT TTGGGGTCAG CGAGGAAAAC
TGGCGTGATG CCATCGCCAA AGATCCTCAT TACAGCGAAT CAGAAACGCC CTACTATCTG
GGTCGGGCAA TTGTAGCTTT GGCCAGCGAC TCCAACATTG CTCAAAAAGC TGGCAAAACC
TGGGCTTCTT GGACCTTGAT GGAAGAATAT GGCTTCTTCG ATGTTGATGG CCGTCAGCCC
AATTGGGGCG CGTATTATGC CAAAGTCTTA GAACAAGGAT AA
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| Protein sequence | MTTKPLVGKV ALVAGATRGC GRGIAVSLGE AGATVYCTGR TTRNQRSPIN RTETIDDTAE
MVTAAGGQGI AIQVDHNDPA QVEALIQRIN TEQSGQLDIV VNDIWGGQHA LVWEQKFWQG
DIHTNLNLVH NSIDTHLITS FYAAPLMVAR GQGLIIEVTD GDTLNYRGHS IYDLIKTSVM
RIAVGMHEDL KDHGVTALAV TPGFLRSEEM LDYFGVSEEN WRDAIAKDPH YSESETPYYL
GRAIVALASD SNIAQKAGKT WASWTLMEEY GFFDVDGRQP NWGAYYAKVL EQG
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