| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2046 |
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| Symbol | |
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| ID | 5058509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2318023 |
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| End bp | 2319675 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640474311 |
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| Product | glucose/ribitol dehydrogenase |
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| Protein accession | YP_001158877 |
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| Protein GI | 145594580 |
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| COG category | [I] Lipid transport and metabolism
[L] Replication, recombination and repair
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG4912] Predicted DNA alkylation repair enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.164018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGATG TCAGCGCCGA GCAGCTCGTC GAAAGGTTGC AGACGTACCA GTCGGATGAG
GAGCTCCGCA AGATCCAGCG CTACTTCAGG CACGCCGAGG GCGACACGTT CCTGGGCGTC
CGGATGGGGC AGGTATTCGC ACTGGCCAAA GAATTCATCG ACCTGGCGCC CGGCGAGATC
GAAACCCTAC TCGACAGCCC GATCCACGAG GTACGCGCCG GCGCGGTAAG CATCATGTCC
AAGCAGGCCG CGCGGAAAAG GACCACCGAC GCGCGCCGGG CGGAGCTGTA CGACCTCTAC
CTGCGCCGGC ACGACCGGAT CGACAACTGG GACCTGGTCG ACCTCGGTGC CGCGAACGTG
GTGGGGGCGT ATCTGGTCGA CAAGCCCCGC GACGTGCTGT ACGAGTTGGC CCGCTCGGAC
GACCCGTGGC AGCGACGAAC CGCGATCGTC AGCACCATGG CGTTCCTACG TGCCGGTGAC
CTCGACGACA CGTTCCGGAT CGCCGAGATG TTCGTTGCTG ATCCACATGA TCTGATCCAC
AAGGCCACCG GCTGGCTGCT GCGCAGTGCC GGGGACCAGG ACCGGGCGCG GCTGCTCGAC
TTCCTCGACC GACACGCGGC CACCCTGCCC CGGACACTAC TGCGCGCAGC CATCGAGCAC
CTCGACAGGG AGCAGCGGAC CTACTACCTG GGCCGGAAAA GACCGAGCAG GGAGCCTCGG
TTCGCCGCTA GCGTGCGACG CATGGCCAAG CTGCTGACCG GTAAAGTGGC GCTCGTCGCT
GGAGGAACCC GGGGCGCCGG GCGAGGAACT GCCATCCAGC TCGGAGCGGC TGGGGCTACG
GTCTACGTCA CCGGCAGATC AACTCGTGCC CAACGTTCCG AGATGAACCG GCCAGAGACC
ATTGAGGAGA CCGCGGAGTT GGTCAGCGCC GCTGGCGGAG TCGGCATCGC GGTGCGGGTC
GACCATCTGA TCCCCGACGA GGTACGCGAG CTGATCGCAC GGATCGATTC CGAGCAGGGC
GCCCTCCACG TACTGGTCAA CGACATCTGG GGCACCTCCC AGGTGGAGTG GAACAAAGCG
GTCTGGGAGT CGGACCTACA CGCCGGACTG CACACGCTTC GTCTCGCCGT GGACACCCAC
GCCATCACCA GCCACTTCGC GCTGCCACTG CTCATCAGGA GCCCGGGTGG GCTGGTTGTC
GAAATGACCG ACGGGACAGA CGACTACAAC GCGGCTACCT ACCGCAATTC GTTCTTCTAC
GACCTCGCCA AGGGCGCCGT GAGTCGGATG GCGTTCGCGC TGGCGCATGA ACTCCGGTCA
CACGACACGA CGTCGGTGCT GCTCACGCCG GGATGGTTGC GCTCTGAGGA GATGCTGGAC
TCCCTCGGTG TGACCGAGGA AAACTGGCGC GACGCTCTCC CGATCGAGCC CCACTTCGCA
ATCTCCGAGA GCCCGGCGTA CGTTGGCCGC GCCGTGGCGG CACTGGCACA GGATCCTGAC
GTATCCCGAT GGCACGGCAG GTCGCTCTCC AGCGGGGAGC TGGCGAAGGT CTACGGGTTC
ACCGACCTTG ATGGGAGTAG ACCCGACGCC TGGCGATACC TGGTCGAGGT GCAGGACATC
GGCAAGCCCG CTGACGCGAC CGGATATCGC TGA
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| Protein sequence | MPDVSAEQLV ERLQTYQSDE ELRKIQRYFR HAEGDTFLGV RMGQVFALAK EFIDLAPGEI
ETLLDSPIHE VRAGAVSIMS KQAARKRTTD ARRAELYDLY LRRHDRIDNW DLVDLGAANV
VGAYLVDKPR DVLYELARSD DPWQRRTAIV STMAFLRAGD LDDTFRIAEM FVADPHDLIH
KATGWLLRSA GDQDRARLLD FLDRHAATLP RTLLRAAIEH LDREQRTYYL GRKRPSREPR
FAASVRRMAK LLTGKVALVA GGTRGAGRGT AIQLGAAGAT VYVTGRSTRA QRSEMNRPET
IEETAELVSA AGGVGIAVRV DHLIPDEVRE LIARIDSEQG ALHVLVNDIW GTSQVEWNKA
VWESDLHAGL HTLRLAVDTH AITSHFALPL LIRSPGGLVV EMTDGTDDYN AATYRNSFFY
DLAKGAVSRM AFALAHELRS HDTTSVLLTP GWLRSEEMLD SLGVTEENWR DALPIEPHFA
ISESPAYVGR AVAALAQDPD VSRWHGRSLS SGELAKVYGF TDLDGSRPDA WRYLVEVQDI
GKPADATGYR
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