| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3919 |
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| Symbol | |
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| ID | 4645159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 4188874 |
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| End bp | 4189680 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639807381 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_954702 |
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| Protein GI | 120404873 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.208676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGACA TCGCACCGGT GGCCGTGGTG ACGGGCGCCA GCCGCGGCGC CGGACAGGGC
ATCGCGACCG CACTGGCCGG CCGTGGGTGG CGGGTGTACG GCACGGGGCG CACCGTGGCC
GACGCGCCGG CGTGGGGGAC CGGGGTGCGG GTGGACCACC GCGACGACGA CGCCGTCGGC
GCACTGTTCG AGCGCGTCGG GGCCGAGGCC GGCCGTCTCG ACCTGCTGGT CAACAACGCC
GCGGTGATCT CCGACGATCT GGTGAGCCCG AAGCCCTTCT GGGAGAAACC GCGCGCTCTG
GCCGACGTCC TCGACGTCGG CCTGCGTTCG GCCTACATCG CGTCATGGCA CGCCGCACCG
CTGCTGACCG CGCAGCAGCG CGGGCTCGTC GTCTTCACGT CCTCGCCCGG GTCGGTCTGT
TACATGCACG GCCCCGCCTA CGGCGCCCAG AAGGCCGGCG TCGACAAGAT GGCCGCCGAC
ATGGCGGTCG ACTTCCGCGG GACCGGGGTG AGCGCGGTGT CGATCTGGAT GGGCATCCTG
CTGACCGACA AGTTGCGGTC GGCGTTCGAC GGCAGTCCCG AAGCGCTCGC GGCCTTCGCC
GAGCAGGCCG AGACGCCGGA GTTCACCGGC CACGTGATCG ATGCGCTGTT CCGCGATCCC
GAACTCGACG ACGTCAGCGG ACACACCCTG ATCGCGGCGG AACTGGCGAC CCGCTACGGC
ATCACCGACG AGGGTGGACG CACCCCGCCG TCACACCGGC AGATGCTGGG GGCGCCGCGG
GAACCGAGCC CGGTGATCAT CCGCTGA
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| Protein sequence | MGDIAPVAVV TGASRGAGQG IATALAGRGW RVYGTGRTVA DAPAWGTGVR VDHRDDDAVG
ALFERVGAEA GRLDLLVNNA AVISDDLVSP KPFWEKPRAL ADVLDVGLRS AYIASWHAAP
LLTAQQRGLV VFTSSPGSVC YMHGPAYGAQ KAGVDKMAAD MAVDFRGTGV SAVSIWMGIL
LTDKLRSAFD GSPEALAAFA EQAETPEFTG HVIDALFRDP ELDDVSGHTL IAAELATRYG
ITDEGGRTPP SHRQMLGAPR EPSPVIIR
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