Gene PP_2783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2783 
Symbol 
ID1041924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3170992 
End bp3171729 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content62% 
IMG OID637146205 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionNP_744927 
Protein GI26989502 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.335841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGA AAATAGCTGT CGTGACCGGC GGCAGTCGCG GCATTGGCAA GTCCATCGTG 
CTGGCCCTGG CCGGCGCGGG TTATCAGGTT GCCTTCAGTT ATGTCCGTGA CGAGGCGTCA
GCCGCTGCCT TGCAGGCGCA GGTCGAAGGG CTCGGCCGGG ACTGCCTGGC CGTGCAGTGT
GATGTCAAGG AAGCGCCGAG CATTCAGGCG TTTTTTGAAC GGGTCGAGCA ACGTTTCGAG
CGTATCGACT TGTTGGTCAA CAACGCCGGT ATTACCCGTG ACGGTTTGCT CGCCACGCAA
TCGTTGAACG ACATCACCGA GGTCATCCAG ACCAACCTGG TCGGCACGTT GTTGTGCTGT
CAGCAGGTGC TGCCCTGCAT GATGCGCCAA CGCAGCGGGT GCATCGTCAA CCTCAGTTCG
GTGGCCGCGC AAAAGCCCGG CAAGGGCCAG AGCAACTACG CCGCCGCCAA AGGCGGTGTA
GAAGCATTGA CACGCGCACT GGCGGTGGAG TTGGCGCCGC GCAACATCCG GGTCAACGCG
GTGGCGCCCG GCATCGTCAG CACCGACATG AGCCAAGCCC TGGTCGGCGC CCATGAGCAG
GAAATCCAGT CGCGGCTGTT GATCAAACGG TTCGCCCGGC CTGAAGAAAT TGCCGACGCG
GTGCTGTATC TGGCCGAGCG CGGCCTGTAC ATCACGGGCG AAGTCCTGTC CGTCAACGGC
GGATTGAAAA TGCCATGA
 
Protein sequence
MTQKIAVVTG GSRGIGKSIV LALAGAGYQV AFSYVRDEAS AAALQAQVEG LGRDCLAVQC 
DVKEAPSIQA FFERVEQRFE RIDLLVNNAG ITRDGLLATQ SLNDITEVIQ TNLVGTLLCC
QQVLPCMMRQ RSGCIVNLSS VAAQKPGKGQ SNYAAAKGGV EALTRALAVE LAPRNIRVNA
VAPGIVSTDM SQALVGAHEQ EIQSRLLIKR FARPEEIADA VLYLAERGLY ITGEVLSVNG
GLKMP