| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0102 |
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| Symbol | |
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| ID | 5707051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 113242 |
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| End bp | 114156 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641269628 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001535028 |
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| Protein GI | 159035775 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.440904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000946553 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACAGACA AGCCATTGAC GGGACAGGTT GCCCTCGTGA GCGGAGCCAC CCGTGGCGGA
GGCCGGGGAA TCGCCGTCCA GCTCGGCGCC GCCGGAGCGA CCGTCTACGT GACCGGGCGC
AGCACGACGA CCTCGAGATC GCCGATGAAC CGCCCCGAGA CCACCGAGCA GACCGCCGAC
CTCGTCACCG CCGCCGGCGG TCACGGTATC GCGGCTCCCA CCGATCACCT GGATGTCGCT
CAGGTCCGCG ACCTGGTGGC GAGGATCGAC CGGGAACAGC AGGGCAGGCT CGACATTCTG
GTGAACAACG TCTGGGGTGG CGATCCGCTG ACGGTGTGGG ACAAGCCACT GTGGGAGCAA
CCACTCGACG ATGGCCTGCT GCTACAGCGA CAGGCGGTGC ACACGCACAT CATCACCAGC
TGGCACGCCC TGCCGCTCCT GGTGGCCCGT CGCCGTGGCC TGGTCGTGGA GGTCACCGAC
GGTACGGCCG ACCAGGGCTA CCGGGGAACC TTCTTCTACG ATCTGGCCAA ATCCGGGGTG
ATCCGAGCAG CCCAGGCGCA GGCGGGCGAC CTGCGACCGC ACGGCGTCAC CGCGGTCGCT
CTCACGCCCG GGTTCCTGCG GTCGGAGGCG ATGCTCGACC ACTTCGGCGT GACCGAGGAC
ACCTGGCGGG ACGCCATCAC CGCCGACCCC TACTTCGCGA TGTCGGAGAG CCCTGCCTAC
CTCGGCCGCG CAGTGGCCGC ACTCGCCGCC GACCCGGACG TCAGCCGTTG GAACGGACAG
TCACTGGCGA CCTGGCAACT GGCCAAGGAG TACGGCTTCA CCGACGCGGA CGGGTCGCGG
CCGGACTGGG GTGGCTACTT CGGTGCGACC CAGCAAGGAG ACGGCGACGA CGTCGACCCC
CAGGACTACC GATGA
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| Protein sequence | MTDKPLTGQV ALVSGATRGG GRGIAVQLGA AGATVYVTGR STTTSRSPMN RPETTEQTAD
LVTAAGGHGI AAPTDHLDVA QVRDLVARID REQQGRLDIL VNNVWGGDPL TVWDKPLWEQ
PLDDGLLLQR QAVHTHIITS WHALPLLVAR RRGLVVEVTD GTADQGYRGT FFYDLAKSGV
IRAAQAQAGD LRPHGVTAVA LTPGFLRSEA MLDHFGVTED TWRDAITADP YFAMSESPAY
LGRAVAALAA DPDVSRWNGQ SLATWQLAKE YGFTDADGSR PDWGGYFGAT QQGDGDDVDP
QDYR
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