| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1896 |
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| Symbol | |
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| ID | 4082602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1996000 |
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| End bp | 1996743 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638010272 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
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| Protein accession | YP_616941 |
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| Protein GI | 103487380 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.176277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATC TCACCGGTAT GACCGCCCTC GTCACGGGCG CGAGCGGCGG CATCGGTTCG
GCCATCGCGC AGGCACTCGC AGCACAGGGC GCGCGGCTTG CGGTGTCGGG CTCCAATGCT
GACAAGCTGA ACGCCTTTCG CGATACGCTC GGCGGCGATC ATGTCGCGCT GCCATGTGAC
CTTGGCGATG CTGCTGCGGT CGATGCGCTC GTTCCGGCGG CGGTCGAGGC GCTGGGGGGC
AAGCTCGACA TTCTCGTCAA CAATGCGGGG GTGACGCGCG ACAATCTGAT CATGCGCATG
AAGGACGAGG AGTGGATGGA CGTCATCCGC ATCAACCTGG AGGCCAATTT CCGCCTTGCG
CGGGCGGCGG CAAAGCCGAT GATGAAAGCG CGCTTCGGGC GGATCATTTC GATTACCAGC
GTCGTCGGCG CCACCGGTAA TCCGGGGCAG GCCAATTATG CGGCATCAAA AGCGGGCGTG
ACCGGCATGA CCAAGGCGCT GGCGCAGGAA CTGGCGAGCC GCGGGGTGAC CGCCAATTGC
GTCGCGCCGG GCTTTATCGC CACCGCGATG ACCGACGATC TGCCCGACGC GCAGAAGGAA
GCGCTCAACC AGCGCATCCC CGCGGGCCGG ATGGGCGAGG GCAGCGACAT CGCTGCCGCC
GTCGTCTATC TCGCGTCGAA GGAGGCCGCC TATGTTACCG GACAGACTTT GCATGTAAAC
GGCGGCATGG CCATGCTGTC CTGA
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| Protein sequence | MFDLTGMTAL VTGASGGIGS AIAQALAAQG ARLAVSGSNA DKLNAFRDTL GGDHVALPCD
LGDAAAVDAL VPAAVEALGG KLDILVNNAG VTRDNLIMRM KDEEWMDVIR INLEANFRLA
RAAAKPMMKA RFGRIISITS VVGATGNPGQ ANYAASKAGV TGMTKALAQE LASRGVTANC
VAPGFIATAM TDDLPDAQKE ALNQRIPAGR MGEGSDIAAA VVYLASKEAA YVTGQTLHVN
GGMAMLS
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