| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2571 |
|---|
| Symbol | |
|---|
| ID | 4598428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2738700 |
|---|
| End bp | 2739419 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639777177 |
|---|
| Product | 3-oxoacyl-[acyl-carrier-protein] reductase |
|---|
| Protein accession | YP_923762 |
|---|
| Protein GI | 119716797 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0716578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCCAGA CCCACGAGCC CAGGTCCGTC CTGGTGACCG GCGGCAACCG CGGGATCGGC
CGCGCGATCG CGGAGGCGTA CGTCGCCCAG GGCGACCGCG TCGCCGTCAC CACCCGCAGC
GGCGGTGCCC CCGACGGCGC CCTCGACCTG CGCTGTGACA TCACCGACCC CGCGCAGGTG
GACACGGCGT TCGCCCGGGC CGAGGAGGCT CACGGCCCGG TCGAGGTGCT GGTCGCGAAC
GCCGGGATCA CCGCGGACAC GCTGCTGCTG CGGATGAGCG AAGAGGACTG GTCCTCGGTC
CTCGACACGA ACCTCACCGC CTCGTTCCGG CTGGCGAAGC GCGCCGCCAA GGGCATGCTC
CGGCTGCGCC GGGGGCGGAT CGTCTTCATC TCCTCGGTCG TCGGCCTGCT CGGCTCGGCC
GGCCAGGTGA ACTACGCGGC GTCCAAGGCC GGTCTGGTCG GCATGGCGCG CTCGATCGCG
CGGGAGCTGG GCTCCCGGTC CATCACCGCG AACGTGGTGG CCCCCGGCTT CATCGAGACC
GACATGACGG CCGTGCTGAC CGAGGACCAG CGGGCCGCGA TCAAGGCCCA GGTGCCGCTG
GGGCGCTACG GCACGACGGA GGAGATCGCG AAGACGGTGC TGTGGCTGAC CGGCGACGGC
GCGGCGTACG TCACCGGGGC CGTGATCCCG GTCGACGGTG GACTCGGAAT GGGGCACTGA
|
|---|
| Protein sequence | MTQTHEPRSV LVTGGNRGIG RAIAEAYVAQ GDRVAVTTRS GGAPDGALDL RCDITDPAQV
DTAFARAEEA HGPVEVLVAN AGITADTLLL RMSEEDWSSV LDTNLTASFR LAKRAAKGML
RLRRGRIVFI SSVVGLLGSA GQVNYAASKA GLVGMARSIA RELGSRSITA NVVAPGFIET
DMTAVLTEDQ RAAIKAQVPL GRYGTTEEIA KTVLWLTGDG AAYVTGAVIP VDGGLGMGH
|
|---|
| |