| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2972 |
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| Symbol | |
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| ID | 5190390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3359057 |
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| End bp | 3359794 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640587418 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001268284 |
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| Protein GI | 148548182 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAGA AAATAGCTGT TGTGACCGGC GGCAGTCGCG GCATTGGCAA GGCCATCGTG
CTGGCCCTGG CCGGCGCGGG TTATCAGGTT GCCTTCAGTT ATGTCCGTGA CGAAGCGTCA
GCCGCTGCCT TGCAGACGCA GGTCGAAGGG CTCGGCCGGG AGTGCCTGGC CGTGCAGTGT
GATGTCAAGG AAGCGCCGAG CATTCAGGCG TTTTTTGAAC GGGTCGAGCA ACGTTTCGAG
CGTATCGACT TGTTGGTCAA CAACGCCGGT ATTACCCGTG ACGGTTTGCT CGCCACGCAA
TCGTTGAGCG ACATCACCGA GGTCATCCAG ACCAACCTGG TCGGCACGTT GTTGTGCTGT
CAGCAGGTGC TGCCCTGCAT GATGCGCCAA CGCAGCGGGT GCATCGTCAA CCTCAGTTCG
GTGGCCGCGC AAAAGCCCGG CAAGGGCCAG AGCAACTACG CCGCCGCCAA AGGCGGTGTA
GAAGCATTGA CACGCGCACT GGCGGTTGAG TTGGCGCCGC GCAACATCCG GGTCAACGCG
GTGGCACCCG GCATCGTCAG CACCGACATG AGCCAAGCCC TGGTCGGCGC CCATGAGCAG
GAAATCCAGT CGCGGCTGCT GATCAAACGG TTCGCCCGGC CTGAAGAAAT TGCCGACGCG
GTGCTGTATC TGGCCGAGCG CGGCCTGTAC GTCACGGGCG AAGTTTTGTC CGTCAACGGC
GGATTGAAAA TGCCATGA
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| Protein sequence | MTQKIAVVTG GSRGIGKAIV LALAGAGYQV AFSYVRDEAS AAALQTQVEG LGRECLAVQC
DVKEAPSIQA FFERVEQRFE RIDLLVNNAG ITRDGLLATQ SLSDITEVIQ TNLVGTLLCC
QQVLPCMMRQ RSGCIVNLSS VAAQKPGKGQ SNYAAAKGGV EALTRALAVE LAPRNIRVNA
VAPGIVSTDM SQALVGAHEQ EIQSRLLIKR FARPEEIADA VLYLAERGLY VTGEVLSVNG
GLKMP
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