| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3334 |
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| Symbol | |
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| ID | 5197639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3662307 |
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| End bp | 3663170 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582879 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001263818 |
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| Protein GI | 148556236 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0183767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG ACAATCGCAA GGTCGCCGTC GTCACCGGCG CCAGCCGCGG CGCGGGCGCC
GGCATCGCCC GCGCGCTGGG CGAGGCGGGC TATGCCGTCT ACGTCACCGG CCGCACGGTC
GAGGAAGGCA AGGCGCCGCT GCCCGGCACG ATCGGCGCGA CCGCGCAGGC GGTCGACCGG
CTCGGCGGGC GCGGCGTCGC GGTCGCGGTC GACCATCGCG ACGACGCCCA GGTCAAGGCG
CTGTTCGACC GGGTCGAACG CGACGAGGGC CGGCTCGACA TCCTCGTCAA CAACGCCGCG
ATCATCGACG ACGCGCTGAT CCTGCCGGGC GGCTTCTGGG AACGGCCGCT CGCCCTGGTC
GACATCCTCG ACGTCGGGCT GCGCTCGGGC TATGTCGCGA GCTTCCATGC CGCGCCGCTG
CTGATCCGCA CCGGCGGCGG CCTGATCGCC TTCACCTCCT CCTTCGGCTC GGCCTGCTAC
ATGCATGGGC CCGCTTATGG CGCGCAGAAG GCCGGCGTCG ACAAATTCGC CGCCGACATG
GGCGTCGACC TGCGCGACCA TGACGCCGCC GCCGTCTCGA TCTGGATGGG CCCGCTGCGC
ACCGAGCGGA CCGACAAGGC GATCGCCGAG CGGCCCGACC AATATGAGGC GATCATGGCC
AATGCCGAGA CGCCCGAGTT CACCGGCAAG CTGATCGCCG CGATCCACGC CTCGCCCGAC
CGCATGGCGA TGTCGGGGCA GACCTTCATC GGCGCCGAGC TCGGCGAGCG CTTCGCGATC
CAGGACGCGG GCGGCAAGCA GCCCCCGTCC TTCCGGGCGA TGCTGGGCGA GCCGCGCCTT
CCCCACCCGG CTATCGTTCG CTAA
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| Protein sequence | MSNDNRKVAV VTGASRGAGA GIARALGEAG YAVYVTGRTV EEGKAPLPGT IGATAQAVDR
LGGRGVAVAV DHRDDAQVKA LFDRVERDEG RLDILVNNAA IIDDALILPG GFWERPLALV
DILDVGLRSG YVASFHAAPL LIRTGGGLIA FTSSFGSACY MHGPAYGAQK AGVDKFAADM
GVDLRDHDAA AVSIWMGPLR TERTDKAIAE RPDQYEAIMA NAETPEFTGK LIAAIHASPD
RMAMSGQTFI GAELGERFAI QDAGGKQPPS FRAMLGEPRL PHPAIVR
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