Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12303 |
Symbol | |
ID | 7201114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | + |
Start bp | 555296 |
End bp | 556300 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180072 |
Protein GI | 219118606 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTGTTTGG TGACGGGGGC CAGTCGTGGA ATCGGGAAAG GAATTGCCTT GGAACTTGGC AAGCAGGGAG CGATTGTTTA CATTACGGGC ACGTCTACCA GCGACAATAG CTCGTCGTTG AACGCCGCGA CGGGGCCTTA TTCCGCCACG AAAGAATCCG GTGGACCTGG TACTATTGAG CAGACTGCGC AGGAAATCAT GAACGCGGGT GGTATCGGGG TTGCCGTCCT CTGCAATCAT GCGGTGGACA GTGAAGTGAA GCACCTCATG GACCGTATTG AACGAGACCA CGGTCGCCTT GATATTCTGA TCAACAACGC TTTTCGGCTA CCGCAAGGAG GTGTTGAAAT GCTGTACAAA AAGTTCTGGG AACAGGGTCC AGAAATATGG GATACTCTAC ACACGGTTGG TCTGCGTAGC CACTTCGTCG CCAGCGTTTA TGCCATGCCA CTTCTGCAAG CCGCCAAGAA AAATCCGCAG CGTAATTTAC CTCGCCCTTT CGTTGGGATG GTTTCATCCT TTGGAGGACT AACGTATACC TTCAACGTAC CGTATGGAGT TGGAAAGGCC GGAGTAGACC GATTGGCCAA AGACATGGCC GTCGAACTAA CACCAGAAGA TATCTGTGTT GTTTCCTTCT GGCCCGGAGT TGTGGACACG GAACGAACCC AAGAAAGCGT CAAAAAAGGC GATTGGGAGA AATACGTGGG ACTTCCACTT GACAATGCAG AAACGCCAGG CTTCACAGGC AAAGCTATTA TAGCTACCGC TACCGACCCG AGCAATATGC GCAAAACTGG AACGTATCAA GTCGTTGCAG AATTGTCGGA GGAGTACAAT TTTTTCGACG TCAATGGGAA TCGACCGCCC AGCATTCGTT CTCTACGATT TCTGCTTCCA AGCTACGCCT TTGATCAAGC TACAAGAGAT ATGGTACCTG GTTGGATGAT TCCAGACTGG AAGCTGCCGT TTTGGGTCAT GGCGCAGGGA CAACCACCAG CGTAA
|
Protein sequence | VCLVTGASRG IGKGIALELG KQGAIVYITG TSTSDNSSSL NAATGPYSAT KESGGPGTIE QTAQEIMNAG GIGVAVLCNH AVDSEVKHLM DRIERDHGRL DILINNAFRL PQGGVEMLYK KFWEQGPEIW DTLHTVGLRS HFVASVYAMP LLQAAKKNPQ RNLPRPFVGM VSSFGGLTYT FNVPYGVGKA GVDRLAKDMA VELTPEDICV VSFWPGVVDT ERTQESVKKG DWEKYVGLPL DNAETPGFTG KAIIATATDP SNMRKTGTYQ VVAELSEEYN FFDVNGNRPP SIRSLRFLLP SYAFDQATRD MVPGWMIPDW KLPFWVMAQG QPPA
|
| |