Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0882 |
Symbol | |
ID | 8724612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1056660 |
End bp | 1057448 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003385735 |
Protein GI | 284035805 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.845671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGTTA CTTTTGAAAA CGAACTGACA GGCAAAATAG CCCTGGTTAC CGGCGGCAGT AAAGGAATGG GTAAGGCGAT CGCCGATCGG CTGCTGACAG CGGGAGCCAC CGTGATCGTT ACGGCCCGAA ACAAGCCGGA AGACCAAACG GATGGCATTC AGTTCATCGC TGCCGATTTA AGCAAACCGG ACGGAACCCG TAAAGTGATC GACGAAATCC TTGATACTTT TGGCCATCTG GACATCCTGG TTAATAATAT GGGGGGCTCC GAAACACTAG CGGGCGGGTT TGCCGTGCTG TCTGATGAGG ATTGGGAGTC ATCGTTTCAA ACTAATCTGA TGGCACCCGT GCGACTGGAC CGTGGGTTAT TGCCGGGCAT GATCAGGCGC GGGAAAGGGG TCATTATTCA CATCGCATCC ATCCAGGCCA AATTGCCGCT GTATGACTCC ACGCTGCCCT ATGCTGCGGC AAAAGCAGCC CTGGTCAATT ACAGCAAAAG CCTGTCGAAT GAAGTGGCAC CCAAAGGGGT GCGCGTGCTG ACCGTATCGC CGGGTTGGGT TATGACCACA GCATCGAGCC GAATGATGGA GCGTATCGCC GAGAGCTCGG ACGGCACCGT CGAACAGGCG ACTAAGGGGG TAATGGATGC ACTGGGTGGT ATTCCCTTCG GCAGACCCGC CTGGCCGCAG GAAGTGGCGG AGCTGGTGGG CTTCCTGGTT TCGCCCCGAG CGGCCTATCT GACTGGCACC GACTTTGTCA TCGACGGCGG CACAATCCCC ACCATATAA
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Protein sequence | MEVTFENELT GKIALVTGGS KGMGKAIADR LLTAGATVIV TARNKPEDQT DGIQFIAADL SKPDGTRKVI DEILDTFGHL DILVNNMGGS ETLAGGFAVL SDEDWESSFQ TNLMAPVRLD RGLLPGMIRR GKGVIIHIAS IQAKLPLYDS TLPYAAAKAA LVNYSKSLSN EVAPKGVRVL TVSPGWVMTT ASSRMMERIA ESSDGTVEQA TKGVMDALGG IPFGRPAWPQ EVAELVGFLV SPRAAYLTGT DFVIDGGTIP TI
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