Gene Slin_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0882 
Symbol 
ID8724612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1056660 
End bp1057448 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content56% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003385735 
Protein GI284035805 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.845671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGTTA CTTTTGAAAA CGAACTGACA GGCAAAATAG CCCTGGTTAC CGGCGGCAGT 
AAAGGAATGG GTAAGGCGAT CGCCGATCGG CTGCTGACAG CGGGAGCCAC CGTGATCGTT
ACGGCCCGAA ACAAGCCGGA AGACCAAACG GATGGCATTC AGTTCATCGC TGCCGATTTA
AGCAAACCGG ACGGAACCCG TAAAGTGATC GACGAAATCC TTGATACTTT TGGCCATCTG
GACATCCTGG TTAATAATAT GGGGGGCTCC GAAACACTAG CGGGCGGGTT TGCCGTGCTG
TCTGATGAGG ATTGGGAGTC ATCGTTTCAA ACTAATCTGA TGGCACCCGT GCGACTGGAC
CGTGGGTTAT TGCCGGGCAT GATCAGGCGC GGGAAAGGGG TCATTATTCA CATCGCATCC
ATCCAGGCCA AATTGCCGCT GTATGACTCC ACGCTGCCCT ATGCTGCGGC AAAAGCAGCC
CTGGTCAATT ACAGCAAAAG CCTGTCGAAT GAAGTGGCAC CCAAAGGGGT GCGCGTGCTG
ACCGTATCGC CGGGTTGGGT TATGACCACA GCATCGAGCC GAATGATGGA GCGTATCGCC
GAGAGCTCGG ACGGCACCGT CGAACAGGCG ACTAAGGGGG TAATGGATGC ACTGGGTGGT
ATTCCCTTCG GCAGACCCGC CTGGCCGCAG GAAGTGGCGG AGCTGGTGGG CTTCCTGGTT
TCGCCCCGAG CGGCCTATCT GACTGGCACC GACTTTGTCA TCGACGGCGG CACAATCCCC
ACCATATAA
 
Protein sequence
MEVTFENELT GKIALVTGGS KGMGKAIADR LLTAGATVIV TARNKPEDQT DGIQFIAADL 
SKPDGTRKVI DEILDTFGHL DILVNNMGGS ETLAGGFAVL SDEDWESSFQ TNLMAPVRLD
RGLLPGMIRR GKGVIIHIAS IQAKLPLYDS TLPYAAAKAA LVNYSKSLSN EVAPKGVRVL
TVSPGWVMTT ASSRMMERIA ESSDGTVEQA TKGVMDALGG IPFGRPAWPQ EVAELVGFLV
SPRAAYLTGT DFVIDGGTIP TI