Gene Tcr_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0712 
Symbol 
ID3760395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp781073 
End bp781813 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content45% 
IMG OID637785425 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_390982 
Protein GI78485057 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000308432 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATCTG GAAAAATTGC ATTTGTGACT GGCGCGAGCC GCGGTATTGG AAAAGCGATT 
GCTTTGGACC TGGCAGCGAG TGGCGCGACA GTTATTGGAA CAGCCACCTC TGAAAAAGGT
GCCCAAGCGA TTTCAGATTA TCTGAGCGCT GCGGGTGCTA AAGGTACAGG GAAATGCTTA
AATGTAACAG ATGCAGACAT GATTGCATCG GTTTTGTCTG AAGTCACCAA AGAGTTCGGG
ACACCAACGA TTTTAGTGAA TAATGCCGGC ATTACGCGTG ACAACTTATT GATGCGAATG
AAAGATGAAG AATGGGATGA TATTATCGAT ACCAATCTGA GTTCCGTTTA CCGTATGTCA
AAAGCCTGTT TGCGCGGCAT GATGAAAGCC AAGCAAGGTG CGATTATTAA TATCGCGTCA
GTCGTGGGTG TGATGGGGAA CGCAGGTCAA ACTAACTATG CCGCGGCTAA AGCCGGTATT
ATGGGGTTCA CCAAGTCTCT CGCACGTGAA ATTGGTGCGA AAAACGTTAC CGTTAATACC
GTTGCACCTG GTTTTATCGA TACCGATATG ACGCGTGCGC TACCAGAAGA ACAGCGTGAA
GCCTTAACAC AACAGATTCC GTTAAAACGT TTAGGCGAGC CAGAAGACAT TGCCAAAACA
GTCACTTTTT TAGCGTCAGA AGGCGGTAGT TATATCACAG GCCAAACGTT AAATGTAAAT
GGTGGTATGT ATATGATTTA A
 
Protein sequence
MLSGKIAFVT GASRGIGKAI ALDLAASGAT VIGTATSEKG AQAISDYLSA AGAKGTGKCL 
NVTDADMIAS VLSEVTKEFG TPTILVNNAG ITRDNLLMRM KDEEWDDIID TNLSSVYRMS
KACLRGMMKA KQGAIINIAS VVGVMGNAGQ TNYAAAKAGI MGFTKSLARE IGAKNVTVNT
VAPGFIDTDM TRALPEEQRE ALTQQIPLKR LGEPEDIAKT VTFLASEGGS YITGQTLNVN
GGMYMI