| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0712 |
|---|
| Symbol | |
|---|
| ID | 3760395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 781073 |
|---|
| End bp | 781813 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637785425 |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
|---|
| Protein accession | YP_390982 |
|---|
| Protein GI | 78485057 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000000000308432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTATCTG GAAAAATTGC ATTTGTGACT GGCGCGAGCC GCGGTATTGG AAAAGCGATT
GCTTTGGACC TGGCAGCGAG TGGCGCGACA GTTATTGGAA CAGCCACCTC TGAAAAAGGT
GCCCAAGCGA TTTCAGATTA TCTGAGCGCT GCGGGTGCTA AAGGTACAGG GAAATGCTTA
AATGTAACAG ATGCAGACAT GATTGCATCG GTTTTGTCTG AAGTCACCAA AGAGTTCGGG
ACACCAACGA TTTTAGTGAA TAATGCCGGC ATTACGCGTG ACAACTTATT GATGCGAATG
AAAGATGAAG AATGGGATGA TATTATCGAT ACCAATCTGA GTTCCGTTTA CCGTATGTCA
AAAGCCTGTT TGCGCGGCAT GATGAAAGCC AAGCAAGGTG CGATTATTAA TATCGCGTCA
GTCGTGGGTG TGATGGGGAA CGCAGGTCAA ACTAACTATG CCGCGGCTAA AGCCGGTATT
ATGGGGTTCA CCAAGTCTCT CGCACGTGAA ATTGGTGCGA AAAACGTTAC CGTTAATACC
GTTGCACCTG GTTTTATCGA TACCGATATG ACGCGTGCGC TACCAGAAGA ACAGCGTGAA
GCCTTAACAC AACAGATTCC GTTAAAACGT TTAGGCGAGC CAGAAGACAT TGCCAAAACA
GTCACTTTTT TAGCGTCAGA AGGCGGTAGT TATATCACAG GCCAAACGTT AAATGTAAAT
GGTGGTATGT ATATGATTTA A
|
|---|
| Protein sequence | MLSGKIAFVT GASRGIGKAI ALDLAASGAT VIGTATSEKG AQAISDYLSA AGAKGTGKCL
NVTDADMIAS VLSEVTKEFG TPTILVNNAG ITRDNLLMRM KDEEWDDIID TNLSSVYRMS
KACLRGMMKA KQGAIINIAS VVGVMGNAGQ TNYAAAKAGI MGFTKSLARE IGAKNVTVNT
VAPGFIDTDM TRALPEEQRE ALTQQIPLKR LGEPEDIAKT VTFLASEGGS YITGQTLNVN
GGMYMI
|
|---|
| |