| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4238 |
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| Symbol | |
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| ID | 8360411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5300463 |
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| End bp | 5301257 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966405 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_003123893 |
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| Protein GI | 256423240 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.210209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.968836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGC AATTCAACTA CAGCAACGAA TTATCCGGTA AGATAGCTTT AGTAACAGGT
GGAACCAAGG GGGCTGGCAG AGCAATCGCA GAACGCTTAA AGGCCGCTGG TGCAACAGTA
GTCATTACCG CGAGGAACAA ACCCGAACAG TCCGATGCAG ACCTTTATTT TGTTCCTGCA
GACCTAAGCA AGCCAGAAGA GTCGCAAAAA GTAATCAGCG AAGTGCTGTC AACCTATGGC
AGGCTGGATA TCCTGGTTAA CAACCTTGGT GGTTCATCAA CACCCGCCGG TGGCTTTTCA
GCATTGAATG ATGAGGATTG GATATCAACC TTACAAGCAA ATTTACTTGC TCCCGTCAGG
CTTGACAGAG GATTTTTACC GCAAATGATC GATCGGAAAA GTGGTGTAAT TATTCACATC
GCTTCCATCC AGGGCAAATT GCCGCTATAT GATTCTACGT TGCCGTACGC GGCTTCAAAA
GCAGGATTAA TCAATTACAG TAAAAGCTTA TCAAATGAAG TTGCGCCTAA AGGTGTCCGC
GTGCTGACTG TTTCGCCGGG ATGGATAAAT ACAACAGCAT CGATAGCCTG GTTGGGCGAG
ATCGCAAGAA ATGCAAATAG TACTGTAGAA GAAGCTCAGC AAAGTGTCAT GCATGCATTG
GGTGGAATAC CTTATGGCAG ACCCGCCGAA CCGGAAGAAG TCGCAGAATT GGTTGGCTTT
TTAGTTTCAC CGAGAGCTAA ATACTTAACA GGAACAAATT TCGTCATCGA CGGAGGAACA
ATACCTACAG TCTAA
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| Protein sequence | MEQQFNYSNE LSGKIALVTG GTKGAGRAIA ERLKAAGATV VITARNKPEQ SDADLYFVPA
DLSKPEESQK VISEVLSTYG RLDILVNNLG GSSTPAGGFS ALNDEDWIST LQANLLAPVR
LDRGFLPQMI DRKSGVIIHI ASIQGKLPLY DSTLPYAASK AGLINYSKSL SNEVAPKGVR
VLTVSPGWIN TTASIAWLGE IARNANSTVE EAQQSVMHAL GGIPYGRPAE PEEVAELVGF
LVSPRAKYLT GTNFVIDGGT IPTV
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