| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2058 |
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| Symbol | |
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| ID | 6409718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2230933 |
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| End bp | 2231673 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642711944 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001991056 |
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| Protein GI | 192290451 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGAGC TGACGGGCAA GCGGGCATTG GTGACCGGAG CCTCGCGCGG CATTGGCGCA
GCAATCGCGA TGGACCTGGC GGCCAAGGGC GCGGACGTCG CGATCACTTA TGAACGATCG
GCCGATCGAG CCGCCGAGGT GGTGCGGGCA ATCGCGGCAA AGGGCCGCCG CGGCGTCGCG
ATTCAGGCCG ATAGCGCCGA TCCGGCGGCC TTGAAGTCCG CAGTGGACGA GGCTGCGGCC
CAGCTCGGAG GCCTCGACAT CCTAGTCAAC AATGCCGGGA TCGGCCGCGT CGGCCCGATC
ACCGAACTCA GTCTCGCCGA TATCGACGCG CTGCTGAACA TCAACGTGCG CGCAGTGGTG
CTCGCCTCGC AGGCCGCGAT CCCTCACCTC GGACAGGGCG GACGGATCAT TTCGATTGGT
TCGACGCTTG CCGAGCGAGT GCCGTTCGCA GGTTCGACCG TTTACGCGAT GACCAAGTCG
GCGCTGCACG CCTTCACGCG CGGCCTCTCA CGCGAGCTGG GGCCGCAGGG CGTCACCGTC
AATCTGGTGC AGCCTGGATC GATCGACACC GACATGAACC CGGCGAGTGG CGAGCAGGCC
GACCAGCTCC GCGCCCTGAC GGCGCTCGGG CGCTACGGCA AGCCCGAGGA GATCGCCGCC
GTGGTCGCGT TCCTGGCCAG TCCGGCCGCC GGCCTCATCA CAGGCGCGAT GATCACTGCA
GACGCCGGCT TCTCGGCTTG A
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| Protein sequence | MVELTGKRAL VTGASRGIGA AIAMDLAAKG ADVAITYERS ADRAAEVVRA IAAKGRRGVA
IQADSADPAA LKSAVDEAAA QLGGLDILVN NAGIGRVGPI TELSLADIDA LLNINVRAVV
LASQAAIPHL GQGGRIISIG STLAERVPFA GSTVYAMTKS ALHAFTRGLS RELGPQGVTV
NLVQPGSIDT DMNPASGEQA DQLRALTALG RYGKPEEIAA VVAFLASPAA GLITGAMITA
DAGFSA
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