| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2287 |
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| Symbol | |
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| ID | 5058750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2580521 |
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| End bp | 2581432 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640474549 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001159115 |
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| Protein GI | 145594818 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAGC GCACAGGCCC GCTGGCCGGA AAGGTGGCCC TGGTCGCTGG CGGCACCCGA
GGCGGCGGAC GGGGCATCGC CGTCGAACTC GGTGCCGCCG GCGCGACGGT GTACGTCACC
GGACGAAGCA GCGCCGGAAA GCGCTCCGAC CTGGCCCGCC CGGAGACCAT CGAGCAGACC
GCCGAACGAG TCACCGCCGC CGGCGGACTG GGCATTCCCG TTCGAACCGA CCACAGCCGT
CCCGACGACG TACAGGCGCT CGTCCACACG GTCGCCACCG AGCAGGACGG CCAGCTCGAC
ATCCTGGTCA ACTCGGTATG GGGCGGCGAT CCGCTGGTTG ACTGGGAGCG CCCACTGTGG
GAACAGGACC TGGACACCGG TCTGCGACTG CTGCGGCAGG CGGTGGATAC CCACATCATC
ACCAGCCGGT ACGCGCTCCC CCTTCTGGTC GCCCGCCGCA GCGGCCTGGT CGTGGAGGTG
ACCGACGGCA ACACCGCCCG CTACCGCGGC ACCCTCTTCT ACGACCTGGT GAAATCCGCG
GTCATCCGCC TCGCCGTCGC CCAGGCCGCC GAGCTCAAGC CCCACGGCGT GGCGGCCGTA
GCCATCACGC CGGGCTTTCT CCGCTCGGAG GCCATGCTGG AACACTTCGG TGTCACCGAG
ACCAACTGGC GCGACGGCGT GGCCCAGGAC CCGAACTTCG CCCACTCCGA AACCCCGGCC
TACCTCGGGC GGGCTGTCGC CGCGCTGGCC GCGGACCCCA CCATCATGGC CAAAACCGGG
CGTGCCCTGG CCACCTGGGG CCTCTACCAG GAGTACGGGT TCACCGACAC CGACGGCAGC
CAACCGGACT TCGCCGCCCA CTGGGCCAAG AACCTGGCCG ACCAGCACGG GCCCCTCGGG
GAACCGCTCT GA
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| Protein sequence | MTKRTGPLAG KVALVAGGTR GGGRGIAVEL GAAGATVYVT GRSSAGKRSD LARPETIEQT
AERVTAAGGL GIPVRTDHSR PDDVQALVHT VATEQDGQLD ILVNSVWGGD PLVDWERPLW
EQDLDTGLRL LRQAVDTHII TSRYALPLLV ARRSGLVVEV TDGNTARYRG TLFYDLVKSA
VIRLAVAQAA ELKPHGVAAV AITPGFLRSE AMLEHFGVTE TNWRDGVAQD PNFAHSETPA
YLGRAVAALA ADPTIMAKTG RALATWGLYQ EYGFTDTDGS QPDFAAHWAK NLADQHGPLG
EPL
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