Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_6281 |
Symbol | |
ID | 6983354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011370 |
Strand | + |
Start bp | 231729 |
End bp | 232523 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643399289 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002284045 |
Protein GI | 209552129 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.616501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACTTTT CCACAACCAT GCTGAAAGGC AAGGTCGCCC TCGTAACGGG AGGCGGCTCC GGTATTGGCC GCGCCATCGC GCTTGCACTT GCAGAGGCCG GTGCGAATGT CGCAGTCACC AGCCGCAATG GCAAGACCCT TGAGGATACT GCAGCAGAGG TAAGCTCTTT GGGCGTGCGC GGCCTGGCTA TCGCCGCAAA CGTCTCGCAG AAGACAGAGG TCGATCAGAT GTACCGCAAG GTGATCGAGG AGTTCGGGCA AGTCGACATT CTTGTCAACT GCGCCGGCGG CAGCGCACGT GAAAGATCCT CCCTGTTTTG TGACTCCAGC GAAGAAATCT GGGACGAAAT CATCGCGCTC AACTACAAGG GCGTGCTGAA CGTAACCCAT GCCGCGATCA GTGACATGAT TGCTCGGAAA AGCGGTCGCA TAATCAACAT CTCCTCTCTC GACGGCATCA TCGGCGCAGC GGGTCGCGCC GATTATTCGG GAGCCAAGGC GGCTGTTATC GGTTTCAGCA ACGCCTTGGC GAAAGAAGTT GCTCAGCACA AGATCACCGT GAACAGCATT TCGCCTGGCC CGATCGTGAG TGGCTATGAT GAGATTATGC TCTCTAGCAA CTCGGATGAA TCTAAGAAGT GGGTTCATCA GATGAGCGCG ATCACTGGAT TTGGTTACGG AAGCAAAGCC GACATCTCTT CCGTAGCGCT GTTCCTCGCT TCCGAGAGCT CCGGTTTCAT CAGTGGCCAG AATATCCCGG TCTGTGGTTT GGCGAACATC AACCCGGGTT GGTAA
|
Protein sequence | MDFSTTMLKG KVALVTGGGS GIGRAIALAL AEAGANVAVT SRNGKTLEDT AAEVSSLGVR GLAIAANVSQ KTEVDQMYRK VIEEFGQVDI LVNCAGGSAR ERSSLFCDSS EEIWDEIIAL NYKGVLNVTH AAISDMIARK SGRIINISSL DGIIGAAGRA DYSGAKAAVI GFSNALAKEV AQHKITVNSI SPGPIVSGYD EIMLSSNSDE SKKWVHQMSA ITGFGYGSKA DISSVALFLA SESSGFISGQ NIPVCGLANI NPGW
|
| |