Gene Rleg2_6281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6281 
Symbol 
ID6983354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011370 
Strand
Start bp231729 
End bp232523 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content56% 
IMG OID643399289 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002284045 
Protein GI209552129 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.616501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTT CCACAACCAT GCTGAAAGGC AAGGTCGCCC TCGTAACGGG AGGCGGCTCC 
GGTATTGGCC GCGCCATCGC GCTTGCACTT GCAGAGGCCG GTGCGAATGT CGCAGTCACC
AGCCGCAATG GCAAGACCCT TGAGGATACT GCAGCAGAGG TAAGCTCTTT GGGCGTGCGC
GGCCTGGCTA TCGCCGCAAA CGTCTCGCAG AAGACAGAGG TCGATCAGAT GTACCGCAAG
GTGATCGAGG AGTTCGGGCA AGTCGACATT CTTGTCAACT GCGCCGGCGG CAGCGCACGT
GAAAGATCCT CCCTGTTTTG TGACTCCAGC GAAGAAATCT GGGACGAAAT CATCGCGCTC
AACTACAAGG GCGTGCTGAA CGTAACCCAT GCCGCGATCA GTGACATGAT TGCTCGGAAA
AGCGGTCGCA TAATCAACAT CTCCTCTCTC GACGGCATCA TCGGCGCAGC GGGTCGCGCC
GATTATTCGG GAGCCAAGGC GGCTGTTATC GGTTTCAGCA ACGCCTTGGC GAAAGAAGTT
GCTCAGCACA AGATCACCGT GAACAGCATT TCGCCTGGCC CGATCGTGAG TGGCTATGAT
GAGATTATGC TCTCTAGCAA CTCGGATGAA TCTAAGAAGT GGGTTCATCA GATGAGCGCG
ATCACTGGAT TTGGTTACGG AAGCAAAGCC GACATCTCTT CCGTAGCGCT GTTCCTCGCT
TCCGAGAGCT CCGGTTTCAT CAGTGGCCAG AATATCCCGG TCTGTGGTTT GGCGAACATC
AACCCGGGTT GGTAA
 
Protein sequence
MDFSTTMLKG KVALVTGGGS GIGRAIALAL AEAGANVAVT SRNGKTLEDT AAEVSSLGVR 
GLAIAANVSQ KTEVDQMYRK VIEEFGQVDI LVNCAGGSAR ERSSLFCDSS EEIWDEIIAL
NYKGVLNVTH AAISDMIARK SGRIINISSL DGIIGAAGRA DYSGAKAAVI GFSNALAKEV
AQHKITVNSI SPGPIVSGYD EIMLSSNSDE SKKWVHQMSA ITGFGYGSKA DISSVALFLA
SESSGFISGQ NIPVCGLANI NPGW