| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0026 |
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| Symbol | |
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| ID | 4071731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 25751 |
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| End bp | 26500 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637982026 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_589105 |
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| Protein GI | 94967057 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.94443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAGC TGAGCGGAAA AGTTGCAGTG GTAACGGGCG CGTCGAAAGG AATCGGCGCA
GCAATCGCAA AGACATTGGC AGGCGAAGGC GCGAGCGTAG TCGTGAATTA CGCATCGAGC
AAAGCCGGTG CAGACAAAGT AGTCAACGAG ATTCAGAAAG CCGGCGGCAA GGCGGTAGCC
ATCCACGCCG ATCTCTCCAA GCCGGAAGAT GCCAAGAAAT TAGCGGCGGA AACGAAGAAG
CAGTTCGGTA AAGTGGACAT CCTGGTGAAC AATGCCGGCG TGTACGAATT CCGTCCGCTG
GAACTGATTG ATGAAACGCA CGTCAAAAAG ATCTTCGACC TTAACGTCAC CGGTCTGCTG
TTCACCACGC AGGAATTCGT GAAGCTTATC CCCGAAGAGG GCGGTTCGAT CATCAATATC
AGCTCGGTGG TTGCCAAGAC GCCGCCGTCT GGCAGCGCGG TCTACAGCGC GACCAAAGGC
GCTGTGGATG TGATCTCGCG CGTGCTGGCC CAAGAATTGG GTCCGAAGAA GATCCGCGTG
AACTCGCTCT CGCCGGGATT CACGATCACC GAAGGTGTGC AGGCGTCGGG TTACGAAGAA
GACCTCTCCA AGTCTTCGGT CTTAAGAACG CCGCTCGGCC GCGTAGGCCA GCCGGACGAC
ATTGCCAAAG TCGCATTGTT CCTCGCCTCG GGAGACTCGG GTTGGGTAAC GGGTGAAACG
ATTCTCGCGG GTGGCGGAAT CCGCGTATAA
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| Protein sequence | MGKLSGKVAV VTGASKGIGA AIAKTLAGEG ASVVVNYASS KAGADKVVNE IQKAGGKAVA
IHADLSKPED AKKLAAETKK QFGKVDILVN NAGVYEFRPL ELIDETHVKK IFDLNVTGLL
FTTQEFVKLI PEEGGSIINI SSVVAKTPPS GSAVYSATKG AVDVISRVLA QELGPKKIRV
NSLSPGFTIT EGVQASGYEE DLSKSSVLRT PLGRVGQPDD IAKVALFLAS GDSGWVTGET
ILAGGGIRV
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