Gene Mkms_5392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5392 
Symbol 
ID4613076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5627055 
End bp5627789 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content72% 
IMG OID639795087 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_941368 
Protein GI119871416 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.932372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.125579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCG ACAAGCAGAT CGCGCTGGTG ACCGGCGGGA CATCGGGAAT CGGCCTGGCC 
TCGGCGCGGC TGCTGGCCGC CGAGGGTGCC GAGGTCGTCG TCTCCGGACG CGACGCCGAG
CGTGGGGCAC AGGCCGTGGC CGAGATCGGC GGCGCGGTGA GGTTCGTGCA GGCCGATATG
AGCGACCCTC AGTCGGTGAA GGACCTGGCC GAACAGGCCG GAGACGTCGA CATCCTGGTC
AACAACGCGG GGGTGTTTCC CGCCGCGCCG ACGCTGGACC AGGATCTCGC ATCCTTCGAG
ACCATGTTCG ACACGAACGT GCGCGGCGCC TACTTCCTGG TGGCCGAGGT CGCCAGGGGC
ATGGTCGCGC GCGGGCGGGG CGCGATCGTC AACATCACCT CCCCGGCGGG CGACAAGGGC
TTTCCCGGCA CGTCGGCCTA CGGCGCCACG AAGGCCGCGC TGGCCTCGCT GACCCGTACC
TGGGCCGCGG AGTTCGGCGC CAACGGCGTT CGCGTCAACA GTGTCTCGCC GGGTCCGACG
CGCACACCGG GGACCGCCGA CATGGGCGAC TTCATCGACG ACGTCGCCGG GGCACTGCCG
CTGGGCCGCA CCGCGCGGCC CCGAGGAGGT CGCTCAGGCG GTGCTGTTCC TGACGTCGCC
GCGGTCGAGT TTCGTGACGG GGTCGACGCT GTACGTCGAC GGCGGCGGCT CGGCGGTGTG
ACGCGCCGCC GGTAG
 
Protein sequence
MELDKQIALV TGGTSGIGLA SARLLAAEGA EVVVSGRDAE RGAQAVAEIG GAVRFVQADM 
SDPQSVKDLA EQAGDVDILV NNAGVFPAAP TLDQDLASFE TMFDTNVRGA YFLVAEVARG
MVARGRGAIV NITSPAGDKG FPGTSAYGAT KAALASLTRT WAAEFGANGV RVNSVSPGPT
RTPGTADMGD FIDDVAGALP LGRTARPRGG RSGGAVPDVA AVEFRDGVDA VRRRRRLGGV
TRRR