| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1150 |
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| Symbol | |
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| ID | 3909238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1321914 |
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| End bp | 1322675 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637883044 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_484771 |
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| Protein GI | 86748275 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.718772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGC TCGCCGACAG GATCGCTCTC GTCACCGGCG CCAGCCGCGG CATCGGGCGC
GCGATCGCTG TCCGGCTGGC GCAGGACGGC GCGGTCGTCG GGATCCACTA TCGCGCCGAG
CGCGACAAGG CCGCCGAGTT GCTCGCGCAG ATCCGCAGCG ATGGCGGCGA CGGCTTCCTG
ATCGCAGCCG ATCTCGCCGA CCCCGCCGGC GCCGTGCAAC TCGCCGAAGC GCTGATCGCC
GAACTGCGCC GCCGGCGCGA TCCGCCGCTG CTCGACATCC TCGTCAACAA CGCCGGCATC
GACGACCGCA AGACCATCGA GCAGGTCACC GAAGCCGAGT TCGACCGGAT GTGGCAGGTC
AATTTCAAGT CGCCGTTCTT CCTGATCCAG AAGCTCTTGC CGGTGCTGGC CGATGGCGGC
CGCATCATCA ACATCTCGTC GATGGCGGCG CGGCTGTCGT TTCCGACCAT GCCGGTCTAC
GCGCCGACCA AGGCGGCGCT GTCGACGCTG AGCCGCATCC TCGCCGCGCA TCTCGGCCCG
CGCGGCATCA CGGTGAATGC GGTGCTGCCG GGTGCGACGG CGACCGATCT CAACCCTGCC
GCGTCCGATC CGCAGCGCGC CGCCGCGCTC CGCGACAGCA TCGCGCTCGG CCGCATCGCG
GGGCCAGAGG ACATCGCGCC GATCGTCGCC TTCCTCGCCT CGAAGGACGG CGGCTGGATC
ACCGGCGAGA CCATCGAAGC CAGCGGCGGT CAGCGCCTAT GA
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| Protein sequence | MKPLADRIAL VTGASRGIGR AIAVRLAQDG AVVGIHYRAE RDKAAELLAQ IRSDGGDGFL
IAADLADPAG AVQLAEALIA ELRRRRDPPL LDILVNNAGI DDRKTIEQVT EAEFDRMWQV
NFKSPFFLIQ KLLPVLADGG RIINISSMAA RLSFPTMPVY APTKAALSTL SRILAAHLGP
RGITVNAVLP GATATDLNPA ASDPQRAAAL RDSIALGRIA GPEDIAPIVA FLASKDGGWI
TGETIEASGG QRL
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