| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6333 |
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| Symbol | |
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| ID | 6279971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2595609 |
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| End bp | 2596367 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642617387 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001890030 |
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| Protein GI | 187920998 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.519755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGAAA AATCCGTTGC CCTTGTAACT GGGGCGAACC AGGGAATCGG TCTTCAGATT
GCGAAGGATC TCGCGGCGCG CGGCTTGACT GTACTGGTCG GGTCGCGCAA CCTGGAACGC
GGCGAGGCTG CGGCCACGGA AGTCGGGCTG GGTGCCGTCG CGCTCCAACT CGACGTGACG
GATCAGGCTT CGGTCACATC TGCGGCAGCA CGTATTCGAA ACGAGTTCGG CCGCCTTGAC
GTGCTTATCC AGAACGCGGC CATTTCGAAT ACGAAGAAGC AGCCCGGTCA GTCCGTCGAG
GAATATGCGA AGACAGCGCG CCCCGGCAAC GTGGATCTCG ATGAAATGCG CGCGGTGTGG
GACACCAACG TGTTTGGCGT GCTGGCTGTG TACCAGGCGA TGCTGCCACT TTTGCGCAAG
ACGCCGGGCT CCCGCATCGT TAACGTCTCG AGTGGCGTTG GGTCGTTGAC GACGAACTCG
AACCCTGCCT TCCCTTACCG TGCGATCTTC GGCCCTGTCT ACGCGGCGTC CAAAACGGCC
CTCAACGCTT TGACGGTGGC GATGGCCATC GAACTCGAGC CAGAAGGTAT CAAGGTCAAT
GCCGTCTCCC CAGGCTTTAC CAGAACTAAC CTAAACGGAT ATGCAGGCAC CGAGACCGTC
GAGGAAGGCG CTCGCGAGGC GGTGCGCGTT GCGCTGCTGG GTGCGGACGG CCCAACGGGG
ACATTCACTC GCTGGAACGG GGACACGATC CCATGGTAA
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| Protein sequence | MHEKSVALVT GANQGIGLQI AKDLAARGLT VLVGSRNLER GEAAATEVGL GAVALQLDVT
DQASVTSAAA RIRNEFGRLD VLIQNAAISN TKKQPGQSVE EYAKTARPGN VDLDEMRAVW
DTNVFGVLAV YQAMLPLLRK TPGSRIVNVS SGVGSLTTNS NPAFPYRAIF GPVYAASKTA
LNALTVAMAI ELEPEGIKVN AVSPGFTRTN LNGYAGTETV EEGAREAVRV ALLGADGPTG
TFTRWNGDTI PW
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