| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3160 |
|---|
| Symbol | |
|---|
| ID | 3888966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 3599984 |
|---|
| End bp | 3600730 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637864709 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_466366 |
|---|
| Protein GI | 86159581 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.328176 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAGA ACAAGGTGGC GATCGTGACG GGGGGGAGCC GCGGCATCGG CGCGGCCATC
GCGAAGGCGC TGGCGGCGAG CGGCGCCAAG GTGGCGGTGA ACTACGCGCG CAGCAAGGAG
CACGGGCAGC AGGTGGTCGC GGACATCGCG GCGCGCGGCG GCCGGGCGAT GCTCGCGCGC
GCCGACGTGA CGGTGCCCTC GGAGGTGGAG GGCATGGTCC GCGCGGTCGA GGCGGAGCTC
GGCCCGGTGG ACGTCCTCGT CAACAACGCG AACATGAGCT TCCCCATCGC GCCGTTCGCC
GAGTACCGGT GGGAGGACTT CGAGCGGAAG CTCTGCAGCG AGCTGAAGGC GAGCTTCCTC
ACCTGCCAGG CGGTGGTGCC GGGGATGATC CGGCGGGGCG GTGGCTGCAT CGTCAACGTG
AGCAGCGGCC TCTCGCGCCA GCCCGGGCCC GGGTTCGTCG CCCACTCCAG CGCCAAGGCG
GCGCTCGACG CGTTCTCGCG CTCGCTGGCG CTGGAGCTCG GCCCGCACGG CATCCGCGTC
AACGTGGTGG CCCCGGGCCT GACGCTCACG GACGCGACCG CCTCCCAGCC GAAGGCCATG
CACGACGCCA TCGCCGCCCA CACGCCGCTG CGCCGGCTGG GCGCGCCGGA GGACGTGGCG
GGCGCGGTCC TGTTCCTGTG CGGCGAGGGG GCCCGCCACG TCAGCGGCAC CTACCTGCCG
GTGAGCGGTG GCGCGCACAT GATCTGA
|
|---|
| Protein sequence | MLENKVAIVT GGSRGIGAAI AKALAASGAK VAVNYARSKE HGQQVVADIA ARGGRAMLAR
ADVTVPSEVE GMVRAVEAEL GPVDVLVNNA NMSFPIAPFA EYRWEDFERK LCSELKASFL
TCQAVVPGMI RRGGGCIVNV SSGLSRQPGP GFVAHSSAKA ALDAFSRSLA LELGPHGIRV
NVVAPGLTLT DATASQPKAM HDAIAAHTPL RRLGAPEDVA GAVLFLCGEG ARHVSGTYLP
VSGGAHMI
|
|---|
| |