More than 300 homologs were found in PanDaTox collection
for query gene Slin_0837 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_0837  response regulator receiver protein  100 
 
 
153 aa  312  8e-85  Spirosoma linguale DSM 74  Bacteria  normal  0.925678  normal 
 
 
-
 
NC_013037  Dfer_1444  two component transcriptional regulator, LytTR family  62.39 
 
 
256 aa  149  2e-35  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.317386 
 
 
-
 
NC_013730  Slin_2868  two component transcriptional regulator, LytTR family  52.56 
 
 
259 aa  142  1e-33  Spirosoma linguale DSM 74  Bacteria  normal  0.0154807  normal 
 
 
-
 
NC_013037  Dfer_5405  two component transcriptional regulator, LytTR family  48.57 
 
 
243 aa  137  6e-32  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.379459 
 
 
-
 
NC_013730  Slin_2091  two component transcriptional regulator, LytTR family  44.23 
 
 
259 aa  127  8.000000000000001e-29  Spirosoma linguale DSM 74  Bacteria  normal  0.0504817  normal  0.478744 
 
 
-
 
NC_013132  Cpin_0271  two component transcriptional regulator, LytTR family  52.1 
 
 
256 aa  125  2.0000000000000002e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2775  two component transcriptional regulator, LytTR family  44.59 
 
 
258 aa  125  3e-28  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_2661  two component transcriptional regulator, LytTR family  52.14 
 
 
252 aa  124  5e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_12408  two-component system response regulator  46.41 
 
 
251 aa  123  1e-27  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.401855  n/a   
 
 
-
 
NC_009441  Fjoh_3229  LytTR family two component transcriptional regulator  48.31 
 
 
250 aa  122  2e-27  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2354  two component transcriptional regulator, LytTR family  49.15 
 
 
256 aa  119  9.999999999999999e-27  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6102  two component transcriptional regulator, LytTR family  45.76 
 
 
252 aa  117  6e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_0804  two component transcriptional regulator, LytTR family  47.79 
 
 
251 aa  116  9.999999999999999e-26  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_4908  LytTR family two component transcriptional regulator  51.69 
 
 
255 aa  115  1.9999999999999998e-25  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5824  two component transcriptional regulator, LytTR family  41.83 
 
 
258 aa  115  3e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.0489181 
 
 
-
 
NC_013132  Cpin_6406  two component transcriptional regulator, LytTR family  50 
 
 
252 aa  113  7.999999999999999e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_0758  two component transcriptional regulator, LytTR family  45.76 
 
 
256 aa  112  1.0000000000000001e-24  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.649382 
 
 
-
 
NC_013037  Dfer_1317  two component transcriptional regulator, LytTR family  38.06 
 
 
261 aa  112  2.0000000000000002e-24  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_0600  two component transcriptional regulator, LytTR family  46.22 
 
 
265 aa  112  3e-24  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.315052 
 
 
-
 
NC_013061  Phep_2439  LytTr DNA-binding region  45 
 
 
255 aa  111  4.0000000000000004e-24  Pedobacter heparinus DSM 2366  Bacteria  normal  0.697869  normal 
 
 
-
 
NC_013730  Slin_1794  two component transcriptional regulator, LytTR family  43.09 
 
 
260 aa  109  1.0000000000000001e-23  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_5312  two component transcriptional regulator, LytTR family  49.15 
 
 
255 aa  109  1.0000000000000001e-23  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.0977362 
 
 
-
 
NC_013037  Dfer_1475  two component transcriptional regulator, LytTR family  43.97 
 
 
255 aa  107  4.0000000000000004e-23  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.059663 
 
 
-
 
NC_013061  Phep_2789  response regulator receiver  44.92 
 
 
254 aa  106  9.000000000000001e-23  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_7151  two component transcriptional regulator, LytTR family  43.51 
 
 
249 aa  106  1e-22  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2256  two component transcriptional regulator, LytTR family  39.85 
 
 
262 aa  103  6e-22  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.596319 
 
 
-
 
NC_013132  Cpin_6060  two component transcriptional regulator, LytTR family  40.52 
 
 
253 aa  101  3e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1836  two component transcriptional regulator, LytTR family  47.93 
 
 
258 aa  101  3e-21  Spirosoma linguale DSM 74  Bacteria  normal  0.367672  normal  0.467017 
 
 
-
 
NC_013132  Cpin_5335  two component transcriptional regulator, LytTR family  41.88 
 
 
253 aa  101  4e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.709567 
 
 
-
 
NC_013730  Slin_3726  two component transcriptional regulator, LytTR family  43.59 
 
 
252 aa  99  2e-20  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.304835 
 
 
-
 
NC_009441  Fjoh_4674  LytTR family two component transcriptional regulator  46.22 
 
 
254 aa  99.4  2e-20  Flavobacterium johnsoniae UW101  Bacteria  normal  0.124147  n/a   
 
 
-
 
NC_009441  Fjoh_4001  LytTR family two component transcriptional regulator  40.52 
 
 
255 aa  96.7  1e-19  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_0800  two component transcriptional regulator, LytTR family  40.62 
 
 
251 aa  95.5  2e-19  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0307  two component transcriptional regulator, LytTR family  38.14 
 
 
250 aa  92.4  2e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6676  two component transcriptional regulator, LytTR family  38.14 
 
 
253 aa  89  2e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0979  LytTR family two component transcriptional regulator  38.79 
 
 
242 aa  88.6  3e-17  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0238694 
 
 
-
 
NC_013730  Slin_3594  two component transcriptional regulator, LytTR family  36.44 
 
 
260 aa  85.1  3e-16  Spirosoma linguale DSM 74  Bacteria  normal  0.833136  normal  0.0457058 
 
 
-
 
NC_013037  Dfer_0858  response regulator receiver protein  43.93 
 
 
141 aa  85.1  3e-16  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.748894  normal 
 
 
-
 
NC_009441  Fjoh_3976  LytTR family two component transcriptional regulator  41.03 
 
 
247 aa  84.7  4e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0420  LytR/AlgR family transcriptional regulator  39.58 
 
 
317 aa  84.3  5e-16  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0328897  normal  0.0302219 
 
 
-
 
NC_007954  Sden_1209  LytTr DNA-binding region  35.59 
 
 
240 aa  83.2  0.000000000000001  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_0582  two component transcriptional regulator, LytTR family  38.46 
 
 
253 aa  82.8  0.000000000000002  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.000831919  hitchhiker  0.00409076 
 
 
-
 
NC_007794  Saro_0227  LytR/AlgR family transcriptional regulator  34.29 
 
 
265 aa  80.5  0.000000000000008  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.312706  n/a   
 
 
-
 
NC_008009  Acid345_3838  LytR/AlgR family transcriptional regulator  35 
 
 
254 aa  79.7  0.00000000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.479778 
 
 
-
 
NC_008228  Patl_2385  response regulator receiver protein  39.17 
 
 
272 aa  79.7  0.00000000000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0067  LytTR family two component transcriptional regulator  34.92 
 
 
268 aa  79  0.00000000000002  Opitutus terrae PB90-1  Bacteria  normal  0.169577  normal  0.169612 
 
 
-
 
NC_013501  Rmar_2186  two component transcriptional regulator, LytTR family  31.69 
 
 
275 aa  77.8  0.00000000000004  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01918  putative response regulator in two-component regulatory system  35.66 
 
 
275 aa  77.8  0.00000000000005  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.159199  n/a   
 
 
-
 
NC_013162  Coch_1220  two component transcriptional regulator, LytTR family  32.59 
 
 
238 aa  77.4  0.00000000000007  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.132093  n/a   
 
 
-
 
NC_013037  Dfer_1279  two component transcriptional regulator, LytTR family  30.2 
 
 
248 aa  77  0.00000000000008  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.111911  normal  0.254446 
 
 
-
 
NC_013061  Phep_1585  LytTr DNA-binding region  36.69 
 
 
259 aa  77  0.00000000000008  Pedobacter heparinus DSM 2366  Bacteria  normal  0.80455  normal  0.0356965 
 
 
-
 
NC_009718  Fnod_1246  LytTR family two component transcriptional regulator  37.93 
 
 
254 aa  77  0.00000000000008  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5734  two component transcriptional regulator, LytTR family  34.75 
 
 
257 aa  76.3  0.0000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_0765  LytR/AlgR family transcriptional regulator  39.17 
 
 
247 aa  76.6  0.0000000000001  Psychrobacter cryohalolentis K5  Bacteria  normal  0.584976  normal  0.255142 
 
 
-
 
NC_013132  Cpin_0374  two component transcriptional regulator, LytTR family  33.78 
 
 
242 aa  76.3  0.0000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4801  two component transcriptional regulator, LytTR family  33.05 
 
 
240 aa  75.9  0.0000000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.154299  normal 
 
 
-
 
NC_013037  Dfer_5142  two component transcriptional regulator, LytTR family  36.07 
 
 
244 aa  76.3  0.0000000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.546377  normal 
 
 
-
 
NC_011071  Smal_0617  two component transcriptional regulator, LytTR family  34.75 
 
 
243 aa  76.3  0.0000000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.23864 
 
 
-
 
NC_008009  Acid345_1001  LytR/AlgR family transcriptional regulator  36.07 
 
 
262 aa  76.3  0.0000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0103069 
 
 
-
 
NC_013132  Cpin_0671  two component transcriptional regulator, LytTR family  34.33 
 
 
251 aa  74.7  0.0000000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_0904  LytTR family two component transcriptional regulator  35.04 
 
 
243 aa  74.7  0.0000000000004  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0161  LytR/AlgR family transcriptional regulator  35.25 
 
 
270 aa  74.7  0.0000000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0495  response regulator receiver and SARP domain protein  31.4 
 
 
365 aa  73.9  0.0000000000007  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000000108458  n/a   
 
 
-
 
NC_013730  Slin_6582  two component transcriptional regulator, LytTR family  36.67 
 
 
250 aa  73.6  0.000000000001  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0847  response regulator receiver  33.62 
 
 
232 aa  72.4  0.000000000002  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1016  response regulator  38.84 
 
 
244 aa  72  0.000000000003  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2093  putative two-component response-regulatory protein YehT  35 
 
 
237 aa  71.6  0.000000000003  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_1542  LytTr DNA-binding region  32.48 
 
 
245 aa  72  0.000000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.300206 
 
 
-
 
NC_008009  Acid345_3291  LytR/AlgR family transcriptional regulator  36.21 
 
 
258 aa  71.2  0.000000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.393667  normal 
 
 
-
 
NC_008345  Sfri_2434  putative two-component response-regulatory protein YehT  32.21 
 
 
236 aa  71.2  0.000000000004  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.318628  n/a   
 
 
-
 
NC_009511  Swit_2974  LytTR family two component transcriptional regulator  33.06 
 
 
266 aa  71.2  0.000000000005  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.318128 
 
 
-
 
NC_007912  Sde_3900  response regulator receiver domain-containing protein  36.44 
 
 
261 aa  70.9  0.000000000006  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4382  LytTR family two component transcriptional regulator  30.56 
 
 
273 aa  70.9  0.000000000006  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6623  two component transcriptional regulator, LytTR family  34.19 
 
 
258 aa  70.5  0.000000000007  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0991065  normal  0.080317 
 
 
-
 
NC_008255  CHU_0254  response regulator  32.19 
 
 
251 aa  70.9  0.000000000007  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.437869  normal 
 
 
-
 
NC_010571  Oter_1527  LytTR family two component transcriptional regulator  33.62 
 
 
246 aa  70.9  0.000000000007  Opitutus terrae PB90-1  Bacteria  normal  0.109257  normal 
 
 
-
 
NC_011149  SeAg_B2304  putative two-component response-regulatory protein YehT  34.13 
 
 
239 aa  70.5  0.000000000009  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2397  putative two-component response-regulatory protein YehT  34.13 
 
 
239 aa  70.5  0.000000000009  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.423362  normal 
 
 
-
 
NC_011205  SeD_A2505  putative two-component response-regulatory protein YehT  34.13 
 
 
239 aa  70.5  0.000000000009  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A2348  putative two-component response-regulatory protein YehT  34.13 
 
 
239 aa  70.5  0.000000000009  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2393  putative two-component response-regulatory protein YehT  34.13 
 
 
239 aa  70.5  0.000000000009  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_01905  response regulator  35.17 
 
 
243 aa  69.7  0.00000000001  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_2673  response regulator receiver protein  32.23 
 
 
268 aa  69.7  0.00000000001  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.587227  normal  0.606797 
 
 
-
 
NC_013501  Rmar_1860  two component transcriptional regulator, LytTR family  35 
 
 
266 aa  69.3  0.00000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6586  two component transcriptional regulator, LytTR family  31.9 
 
 
246 aa  69.3  0.00000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.318104  normal 
 
 
-
 
NC_009457  VC0395_A0224  putative two-component response-regulatory protein YehT  27.95 
 
 
237 aa  68.9  0.00000000002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_01160  response regulator of the LytR/AlgR family  33.88 
 
 
238 aa  69.3  0.00000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3718  response regulator  34.71 
 
 
275 aa  68.6  0.00000000003  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1114  LytTR family two component transcriptional regulator  34.91 
 
 
249 aa  68.6  0.00000000003  Opitutus terrae PB90-1  Bacteria  normal  0.677936  normal 
 
 
-
 
NC_012912  Dd1591_0959  putative two-component response-regulatory protein YehT  39.32 
 
 
241 aa  68.6  0.00000000003  Dickeya zeae Ech1591  Bacteria  normal  0.606019  n/a   
 
 
-
 
NC_009253  Dred_2957  response regulator receiver protein  33.88 
 
 
236 aa  68.6  0.00000000003  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00954821  n/a   
 
 
-
 
NC_009436  Ent638_2723  putative two-component response-regulatory protein YehT  31.75 
 
 
239 aa  68.6  0.00000000003  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_2278  LytTr DNA-binding response regulator  32.17 
 
 
280 aa  68.2  0.00000000004  Colwellia psychrerythraea 34H  Bacteria  normal  0.421967  n/a   
 
 
-
 
NC_009674  Bcer98_3958  LytTR family two component transcriptional regulator  32.26 
 
 
246 aa  68.2  0.00000000004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1281  putative two-component response-regulatory protein YehT  32.03 
 
 
236 aa  68.2  0.00000000004  Shewanella amazonensis SB2B  Bacteria  normal  0.155887  normal  0.0159688 
 
 
-
 
NC_013037  Dfer_1502  two component transcriptional regulator, LytTR family  33.05 
 
 
254 aa  68.2  0.00000000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.192215 
 
 
-
 
NC_010468  EcolC_1522  putative two-component response-regulatory protein YehT  33.33 
 
 
239 aa  67.8  0.00000000005  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_2413  putative two-component response-regulatory protein YehT  33.33 
 
 
239 aa  67.8  0.00000000005  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_3487  LytR/AlgR family transcriptional regulator  33.9 
 
 
253 aa  67.8  0.00000000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.76921  normal 
 
 
-
 
NC_012892  B21_02012  hypothetical protein  33.33 
 
 
239 aa  67.8  0.00000000005  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
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