| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1527 |
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| Symbol | |
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| ID | 6204985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1893045 |
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| End bp | 1893785 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641691168 |
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| Product | LytTR family two component transcriptional regulator |
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| Protein accession | YP_001818411 |
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| Protein GI | 182413345 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.109257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCC TGCTGGTGGA TGACGAACGG CTGGCTCGCA ACGAACTGCG CCGGCTGCTG
GGCGCGTTTC CGGATCTGGA GATCGTGGGC GAGGCCGCCA ACGGCCGGCA GGCGCGGCAG
CTGCTCGCCA CGCTCACGCC GGACCTGATG TTCCTCGACG TGCAGATGCC GGGAGAGAGC
GGGATGGAAC TGCTGGAGTC GCTCGAGCCG CCGGTGCCGG ACGTGATTTT CACGACCGCG
TTCGACGAGT TTGCGGTGAA GGCCTTCGAT CTGAACGCGC TCGACTACCT GCTGAAGCCG
GTCGATCCGG CGCGGCTCGC GACGGCGATG GAACGACTGC GGGCGAAGCG CGCGGCCGCG
GCGCTGCCGG CGGGCGAGTC CGGCGCGAAG CCGAACCGCG CGCCGCTCGC GGCGGAGGAC
AAGGTGTTCG TGCGCGAAGG CGATCGCTGC TGGTTCGTCG AGGTGAAGTC GATCCGGTTG
CTGGAGAGCG AGGGCAACTA CACGCGCGTG CATTTCGACC AGGCGCAGCC GCAGCTCTTC
CGTTCGCTCA ACGCGATGGA GGAGCGGCTC GATCCGAAGT ATTTCTTCCG GGCCAACCGG
CGGCAGATCA TCAATCTCGC GTGGATCGAC AAGATCGAGC CGTGGTTCAG CGGCGGGCTG
CTGGTGCACC TGAAAGGCGG CGCCAAGGTC GAGCTCAGCC GCCGCCAGGC GCAGGAATTC
CGCGAGCGGA TGAGTCTGTG A
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| Protein sequence | MKALLVDDER LARNELRRLL GAFPDLEIVG EAANGRQARQ LLATLTPDLM FLDVQMPGES
GMELLESLEP PVPDVIFTTA FDEFAVKAFD LNALDYLLKP VDPARLATAM ERLRAKRAAA
ALPAGESGAK PNRAPLAAED KVFVREGDRC WFVEVKSIRL LESEGNYTRV HFDQAQPQLF
RSLNAMEERL DPKYFFRANR RQIINLAWID KIEPWFSGGL LVHLKGGAKV ELSRRQAQEF
RERMSL
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