| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0904 |
|---|
| Symbol | |
|---|
| ID | 5190153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 959663 |
|---|
| End bp | 960394 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640590736 |
|---|
| Product | LytTR family two component transcriptional regulator |
|---|
| Protein accession | YP_001271504 |
|---|
| Protein GI | 148544134 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCT TAATCGTTGA TGATGAACCG CTTGCTCGTG AAGAACTTCA TTATCTAATT
CAGGGAAATA GTGAAGTTAC AGAAATACTT GAAGCAGATG GGATTTTTAT GGCAGAGGAA
CAAGTAAAAA GTGAACACCC AGATATGGTT TTCCTAGATA TAAAGTTATC TGATGGAAAT
GGGATGGCAT TAGCTGAAAA AATAAAATCA TTTGATAATA GTCCTCATAT TGTCTTTGCC
ACTGCTTATG ATTCCTATGC GTTAGATGCC TTTGAAGCAG ATGCAGTTGA CTATATTTTG
AAGCCATTTT CTGCTAAAAG GGTCAACGAA GCAATTATGC GTGTCGCCAA ATTAATTTCG
CCAGAGGATG ATGCTACCAA AGCTAAGAGG GAATTAAGGC AGAATCCCCG AATTTCAATT
CAAAACGACG AGCGAACGAT CATTTTACAG AAAAAACAAA TACTTTACGT ACAGGCACAG
CAAGGCTTTG TTTATATCTG GACTCTTAAT AAGCATAAAA TCATTAGTCG ACAGACGCTC
ACTAATATTT ATGACCAATT AAAATCTCCA GAATTTTTAC AGATCCATCG TAGTTTTATT
GTCAATTTGA ATGGCGTAAC AGAGCTTCAG CCTAGTTTCA ATCATACTTA TGAGCTGACA
TTAATTGATG GCAGTAAATT ACCGGTAAGT CGTTCATATG TTAATACAAC CAAAAAAGCA
TTAGGTTTAT AA
|
|---|
| Protein sequence | MKVLIVDDEP LAREELHYLI QGNSEVTEIL EADGIFMAEE QVKSEHPDMV FLDIKLSDGN
GMALAEKIKS FDNSPHIVFA TAYDSYALDA FEADAVDYIL KPFSAKRVNE AIMRVAKLIS
PEDDATKAKR ELRQNPRISI QNDERTIILQ KKQILYVQAQ QGFVYIWTLN KHKIISRQTL
TNIYDQLKSP EFLQIHRSFI VNLNGVTELQ PSFNHTYELT LIDGSKLPVS RSYVNTTKKA
LGL
|
|---|
| |