| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4382 |
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| Symbol | |
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| ID | 6118737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5308005 |
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| End bp | 5308826 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641635944 |
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| Product | LytTR family two component transcriptional regulator |
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| Protein accession | YP_001762729 |
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| Protein GI | 170728703 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGC TAAGAACATT GATAATTGAT GATGAACCAT TAGCCCTAAA ATTATTAGGT
TCAAAATTAA AAAATATTCC TGAAATTGAG ATTGTTGCCC AGTGCAATAA TGGCAGAGAA
GCGATTGCGG CGACCATAGA GTTTGAACCC GATCTTATCT TTCTCGATAT TCAGATGCCC
GGAATTGATG GGTTTGGTGT GATAAAAAAG CTGCAAACAG AGATCTTACC CTTAGTCATC
TTCACCACTG CATTTGAACA GTATGCGTTA GATGCCTTTG ATGTGCATGC TGTCGATTAT
ATTTTGAAAC CGATTGATGA TGAGCATATC CAAAGAGCCG TCTCCCGTGC AATACAGCGA
TTTGAAACCG GTGAAACACG CGAAAATAAG CCTAAGATAA TCGGGGCAAT TAATGAGATT
AATTTAAGGG AAAGACGTGC TGACGCTCAT GAAAATAACC AAACAGATAA ACCTACTAGC
TTAGATAATA TTGAGCGTAA AATTGTCATA AAGGACAGAG ATAACATCAC CATTCTCAAA
CAATCTGAGA TTGAATGGAT AGATGCTGCT GGTGACTATG TGTGCATACA CACAGATGCT
GAAACCCATA TCAAACGCAG TACATTGAAG AATCTACTTC AAGATTTAGA CCCCTCGATT
TTTAAACGAG TACACAGGTC GACCATAGTA AACCTGAACT ATATCCAGAA AGTGATCCCC
CATACCAAGG GCGAGTTTTT CCTAAAGCTC GGAGAGTATG ATCAAGTCAA AGTGAGCCGA
AATTATCGAG ATGTGATTAA ATCTTTCCTA TCGGAAAGCT AA
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| Protein sequence | MIKLRTLIID DEPLALKLLG SKLKNIPEIE IVAQCNNGRE AIAATIEFEP DLIFLDIQMP
GIDGFGVIKK LQTEILPLVI FTTAFEQYAL DAFDVHAVDY ILKPIDDEHI QRAVSRAIQR
FETGETRENK PKIIGAINEI NLRERRADAH ENNQTDKPTS LDNIERKIVI KDRDNITILK
QSEIEWIDAA GDYVCIHTDA ETHIKRSTLK NLLQDLDPSI FKRVHRSTIV NLNYIQKVIP
HTKGEFFLKL GEYDQVKVSR NYRDVIKSFL SES
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