| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1281 |
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| Symbol | |
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| ID | 4603533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1570536 |
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| End bp | 1571246 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780631 |
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| Product | putative two-component response-regulatory protein YehT |
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| Protein accession | YP_927158 |
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| Protein GI | 119774418 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.155887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0159688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCAT GCATTCTGGT GGATGATGAG CCCTTCGCCA GGGAGGCCCT GGCCGAGCTA
TTGGTACGCC ATCCAGATGT GAATATCGTG GCACAGGCCA GTAACGCCAT CGAAGCCATA
CAGGCGATAA ACCAGCATAA GCCGGCTTTG TTGTTTTTGG ATATTCAGAT GCCACGCATC
AGCGGAATGG AACTCCTGGC GATGCTCGAT AAAGACACTA TGCCCCGGGT AGTGTTTGTT
ACCGCATTTG ATGAATACGC TATCAAAGCG TTTGAACTGC ATGCCTTTGA TTACCTGCTC
AAACCCATCG ATGATGCCCG ACTGGCGAAC ACCATGGACA GGGTGCGAAA AGACCAGCGG
CCACAGGATG TCACATCGCT TGCTCCCGAG CGCCTCGCTC ATCTTCCCTG CTTCAGCGGT
AATCGTCTGA AAGTGGTTCC GATTGAAGAG GTTGAGTATG TGTTCAGCGA TGTCGGCGGC
ATCCATGTAT CGACGGCCAA TGGCAGGGTG CACACCCAAA TGACCCTCAA ACTGCTGGAA
GAAAAAACCC CGCTGATATT CTGCCATCGC CAATATCTGA TAGCCCCGGC GGCCATCGCA
GAAATCGTAC TGCTTGATGG CGGAGCCGAG GTGGTTACCC GCAGCGGGGC CCGGGTACCG
GTTTCCCGCC GTTATCTTAA GGAACTTAAA TCCCACTTCG GCTTCCTGTA A
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| Protein sequence | MISCILVDDE PFAREALAEL LVRHPDVNIV AQASNAIEAI QAINQHKPAL LFLDIQMPRI
SGMELLAMLD KDTMPRVVFV TAFDEYAIKA FELHAFDYLL KPIDDARLAN TMDRVRKDQR
PQDVTSLAPE RLAHLPCFSG NRLKVVPIEE VEYVFSDVGG IHVSTANGRV HTQMTLKLLE
EKTPLIFCHR QYLIAPAAIA EIVLLDGGAE VVTRSGARVP VSRRYLKELK SHFGFL
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